Fervidobacterium nodosum: Fnod_1383
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Entry
Fnod_1383 CDS
T00579
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
fno
Fervidobacterium nodosum
Brite
KEGG Orthology (KO) [BR:
fno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fno03400
]
Fnod_1383
Enzymes [BR:
fno01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Fnod_1383
DNA repair and recombination proteins [BR:
fno03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Fnod_1383
Prokaryotic type
Fnod_1383
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Het-C
Motif
Other DBs
NCBI-ProteinID:
ABS61230
UniProt:
A7HMU7
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All DBs
Position
1490049..1491359
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AA seq
436 aa
AA seq
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MLSMYLFKRDLRLDDNKALFEALKNSSKIIPIFVFNKTILKEFNAYNQKVGFVVDVLKNI
SKKINLYVFHGEDDEILEFLFSKYKPDALYTAQSFSWQGEERDRNIEKVCRKCNVKFHAV
FDNYLADFRKIPYTKVFTPFYKKWLGYVESQEYEINIEELKRKVVALDLDTIDTILVKFP
ELNQKNEVFTYDYGFERLRSYDFAKYQEQRDFPGLDMSSRLSPYIRFGVLSIRKIHNIAS
KVSPEFVRQLAWREFWYHIKYNFSEFNKLEFLEKRRNVRWRYDEKLFEKFVNAQTGYPIV
DAGIRQLKQENWMHNRVRLIVANFLVKDLLIDWRIGEKFFREYLLDYDEVLNVGNWQWSA
SVGPDPKPLRIFNPMIQSEKFDPNCEYIKKYIPELKNEENYKIHNPLEYKLNYYEPIVNH
YEAVQITKRLYKGMDV
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgctttctatgtatctttttaaaagagaccttaggttagatgacaacaaagcattattt
gaagcgctaaaaaattcatctaaaatcattccgatttttgtattcaataagaccatcctt
aaagaattcaacgcttacaaccaaaaagttggttttgttgtcgatgttttgaagaatatt
tctaagaagataaatttgtatgtttttcatggagaagatgatgagatattagaatttttg
ttctcaaaatataaaccagatgcgctttatacagcgcaatcattttcttggcaaggtgag
gagcgagataggaatattgaaaaagtttgtcgaaagtgtaacgtgaaatttcatgctgtg
ttcgataactatcttgccgattttagaaagataccgtacaccaaggtattcaccccattt
tacaaaaagtggcttgggtatgtggagagtcaggaatatgagataaatatcgaagaatta
aaaagaaaggttgtggcccttgatttggacacaatagatactattctggttaagttccca
gagctaaatcagaagaatgaggtatttacttacgattatggatttgagaggttgcgcagt
tatgattttgctaagtatcaagaacaaagagattttccagggcttgatatgagttctagg
ttatcgccttacatacgttttggggttttatcgataagaaagatacacaatatcgcaagt
aaagttagtccagaatttgttaggcaattagcatggcgcgagttttggtatcatataaag
tataattttagtgagtttaataagttggaatttttggaaaaaagaagaaatgtgagatgg
agatatgatgaaaagctatttgagaaatttgttaacgctcagacaggatatccaattgtc
gatgctgggattaggcaacttaaacaggaaaattggatgcataacagggtcaggctaatc
gtggctaattttttagtgaaagatttacttattgattggcgtattggcgagaagttcttc
agagagtacttacttgattacgatgaggttttaaacgttggcaattggcaatggagtgct
tccgttggcccagacccaaaaccccttaggatatttaatcccatgatacaatcggaaaaa
ttcgacccaaattgtgagtatatcaaaaagtatattcctgaattgaagaatgaagaaaat
tacaaaattcataatccactggagtataagctcaattattatgagcctattgtaaatcac
tatgaggcagtgcaaataaccaaacggttgtataaaggtatggatgtttaa
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