Fusobacterium vincentii 3_1_27: HMPREF0405_00013
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Entry
HMPREF0405_00013 CDS
T03625
Name
(GenBank) chaperone dnaK
KO
K04043
molecular chaperone DnaK
Organism
fnt
Fusobacterium vincentii 3_1_27
Pathway
fnt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fnt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HMPREF0405_00013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fnt03019
]
HMPREF0405_00013
03110 Chaperones and folding catalysts [BR:
fnt03110
]
HMPREF0405_00013
03029 Mitochondrial biogenesis [BR:
fnt03029
]
HMPREF0405_00013
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fnt04147
]
HMPREF0405_00013
Messenger RNA biogenesis [BR:
fnt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
HMPREF0405_00013
Chaperones and folding catalysts [BR:
fnt03110
]
Heat shock proteins
HSP70 / DNAK
HMPREF0405_00013
Mitochondrial biogenesis [BR:
fnt03029
]
Mitochondrial protein import machinery
Matrix
MMC/PAM proteins
HMPREF0405_00013
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
HMPREF0405_00013
Exosome [BR:
fnt04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HMPREF0405_00013
Exosomal proteins of breast cancer cells
HMPREF0405_00013
Exosomal proteins of colorectal cancer cells
HMPREF0405_00013
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
Hydantoinase_A
ParM_N
DUF488
Motif
Other DBs
NCBI-ProteinID:
EFG33753
LinkDB
All DBs
Position
1:186876..188699
Genome browser
AA seq
607 aa
AA seq
DB search
MSKIIGIDLGTTNSCVAIMEGGNVTIIPNSEGARTTPSVVNIKDNGEVVVGEIAKRQAVT
NPTSTVSSIKTHMGSDYKVEIFGKKYTPQEISAKILQKLKKDAEAYLGEEVKEAVITVPA
YFTDSQRQATKDAGTIAGLDVKRIINEPTAAALAYGLEKKKEEKVLVFDLGGGTFDVSVL
EISDGVIEVISTAGNNHLGGDDFDNEVINWLVTEFKKETGIDLSNDKMAYQRLKDAAEKA
KKELSTLMETSISLPFITMDATGPKHLEMKLTRAKFDDLTKHLVEATQGPTKTALKDANL
DTKDIDEILLVGGSTRIPAVQEWVENFFGKKPNKGINPDEVVAAGAAIQGGVLMGDVKDV
LLLDVTPLSLGIETLGGAFTKMIDKNTTIPVKKSQVYSTAADNQTAVTINVLQGERSRAA
DNHSLGTFNLEGIPAAPRGVPQIEVTFDIDANGIVHVSAKDLGTGKENRVTISGSSNLSK
EEIERMTKEAEAHAEEDKKFQELVETRNRADQLISATEKTLKENPDKVSEGDKKNIEDAI
EELKKVKDGDDKSAIDSAMEKLSQASHKFAEELYKEAQAQAQAQQQAGANAGSDKKDEDV
AEAEVVD
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaataataggaattgatttaggaacaacaaactcttgcgtagcaataatggaa
ggtggaaatgtaacaataataccaaactctgagggagcaagaacaactccatcagttgta
aatattaaagataatggtgaagtagttgtaggagaaatagcaaaaagacaagctgtaaca
aatcctacttcaacagtaagttcaatcaaaactcatatgggttctgattataaagtagaa
atttttggaaagaaatatactccacaagaaatttctgctaaaatattacaaaaattgaaa
aaagatgcagaagcctacttaggagaagaagttaaagaagcagttatcacagtaccagct
tactttacagattctcaaagacaagctacaaaagatgctggaacaatagcaggattagat
gtaaaaagaattataaatgaaccaactgctgctgctcttgcttatggacttgaaaagaaa
aaagaagaaaaagtattagtatttgaccttggtggaggaacatttgatgtatctgttctt
gaaatatctgatggtgttatagaagttatatcaacagcaggaaacaaccacttaggtgga
gatgattttgataatgaagttataaattggttagttacagaatttaagaaagaaactgga
attgatttatcaaatgataaaatggcttaccaaagattaaaagatgcagctgaaaaagct
aaaaaagaattatcaacattgatggaaacttcaatttcattaccattcataactatggat
gcaacaggacctaaacacttagaaatgaaattgacaagagcaaaatttgatgatttaaca
aaacatcttgttgaagcaactcaaggacctacaaagactgcattaaaagatgcaaatctt
gatacaaaagatatagatgaaatcttacttgttggaggttctacaagaataccagctgtt
caagaatgggttgaaaacttctttggaaagaaacctaataaaggaataaacccagatgaa
gttgttgctgctggtgctgcaatacaaggtggagtattaatgggagatgttaaagatgtg
ttacttcttgatgtaactccattatcattaggaattgaaactcttggtggagcatttaca
aagatgatagataaaaatactactatcccagtaaaaaaatctcaagtatactcaactgct
gctgataaccaaacagcagttactataaatgtattacaaggtgaaagatcaagagctgct
gataaccatagtttaggaacttttaatttggaaggtatcccagctgctccaagaggtgtg
cctcaaatagaagttacatttgatatagatgctaatggtatagttcatgtatctgcaaaa
gatttaggaactggaaaagaaaatagagtaactatatctggttcaagtaacctttcaaaa
gaagaaattgaaagaatgactaaggaagcagaagcacatgcagaagaagataaaaaattc
caagaattagttgaaactagaaatagagcagaccaattaatctctgctactgaaaagact
ctaaaagaaaatcctgataaagtaagtgaaggagataagaaaaatatagaagatgctatt
gaagaattgaagaaagttaaagatggagatgataagtcagcaatagattctgctatggaa
aaattatcacaagcatctcataaatttgcagaagaattatataaagaagctcaagcacag
gctcaagctcaacaacaagctggagctaatgcaggctctgataaaaaagatgaagatgta
gcagaagcagaagttgtggactaa
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