Formosa sp. Hel3_A1_48: FORMA_16420
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Entry
FORMA_16420 CDS
T04482
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
foh
Formosa sp. Hel3_A1_48
Pathway
foh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
foh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FORMA_16420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
foh03400
]
FORMA_16420
Enzymes [BR:
foh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
FORMA_16420
DNA repair and recombination proteins [BR:
foh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FORMA_16420
Prokaryotic type
FORMA_16420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
FGAR-AT_N
Motif
Other DBs
NCBI-ProteinID:
AOR26792
UniProt:
A0A1D7XU09
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All DBs
Position
1744755..1745426
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AA seq
223 aa
AA seq
DB search
MLRLSKEWNKILSSEFEQPYFCSLEPFVDQEYERNECYPPKNQIFNAFDLCAYYQLKVVI
IGQDPYHGKGQANGLAFSVNDGIAHPPSLINIFKELNSDLGIVYPKSGDLSPWASQGVLL
LNATLTVRTAEAASHQKQGWEIFTDKVIETISTNNNGIVFLLWGGYAQKKKKLIDAQRHL
VLESGHPSPLSANRGYWFGNRHFSKCNAYLKSKGNTPIDWHLD
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
gtgttaagattaagcaaggaatggaataaaattttatcatctgagtttgaacagccctat
ttttgttctctagagccctttgttgatcaagaatatgagcgaaatgaatgttatccacca
aaaaatcaaatttttaacgcctttgatctatgtgcatactatcaattgaaagttgttata
attggtcaagacccctatcacggaaaagggcaagccaatggtttggcattttctgttaac
gatggtattgcgcatccaccatcactcatcaatatcttcaaggagttaaactcagattta
ggtatagtttatcctaaaagtggtgatttgtcaccatgggcatcacagggcgtactgctt
ctcaatgccactttgacggtccgcacagcagaagcagctagccatcaaaagcagggttgg
gaaattttcacagataaagtcattgaaacaatatctactaataacaacggcattgtgttt
ttactttggggcgggtatgcccaaaaaaagaaaaagctgattgatgcccaacggcattta
gtcttggaaagtggccacccttcaccactgagtgcaaacagaggatattggtttggaaat
agacattttagtaaatgcaatgcgtatttaaaatctaaaggaaatacaccaattgattgg
cacttagattga
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