Flavobacterium okayamense: KK2020170_17810
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Entry
KK2020170_17810 CDS
T09418
Name
(GenBank) pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
fok
Flavobacterium okayamense
Brite
KEGG Orthology (KO) [BR:
fok00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fok03009
]
KK2020170_17810
Enzymes [BR:
fok01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
KK2020170_17810
Ribosome biogenesis [BR:
fok03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
KK2020170_17810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
GNVR
Motif
Other DBs
NCBI-ProteinID:
BCY28913
LinkDB
All DBs
Position
1952381..1953415
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AA seq
344 aa
AA seq
DB search
MLENNNEEFEDGDLYEHHRFEVAKGQQPLRVDKFLMNLIENATRSKIQKAAENGNIRVND
EVVKSNYKVKPGDVVQMLLEHPPYEHLLKGENIPLDIVYEDDQLIVVNKPAGMVVHPGHG
NYSGTLVNALAYHFENLPMNSSNRPGLVHRIDKDTSGLLVVAKTELAMDYLTKQFAEKTS
EREYVAIVWGNVEEDKGTIEGNIDRHMTNRMQMAVYPDGDKGKPAVTHFKVLERLGYVTL
ISCQLETGRTHQIRVHMKYIGHTLFNDERYGGNAILKGTTFTKYKQFVDNCFKVLPRQAL
HARTLGFEHPITKEFLRFECEIPNDIKECIEKWRVYSKAQQIEE
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgctggagaataataatgaagaatttgaagatggcgatttatacgaacaccatcgattt
gaagttgctaaaggacaacaaccacttcgtgttgataaatttttaatgaatttaattgaa
aatgctacacgtagtaaaattcagaaagctgctgaaaatggaaatattcgtgtaaacgat
gaagttgttaaatctaattataaagtaaaaccaggtgatgttgtacaaatgttgctggaa
catccaccctatgaacatttgcttaaaggtgaaaatattccacttgatattgtttatgaa
gacgaccaattaattgttgtaaataaacctgcaggaatggttgttcatcctggacatgga
aattacagcggaactttagtcaatgcattagcttatcattttgagaatttacctatgaat
agttcaaatcgtcctggattagtacatcgaattgataaagacacttctggacttttggtt
gttgctaaaacagagttggcaatggattatttaaccaagcaatttgctgaaaaaacatct
gaaagagaatatgttgctattgtttggggtaatgttgaagaagataaaggaactattgaa
ggaaacatagaccgccatatgacaaatcgtatgcaaatggctgtttatcctgacggcgat
aaaggtaaaccagcagttacacattttaaagttttagagcgattaggatatgttacttta
atttcatgccaattagaaactggacgtacgcatcaaattcgtgtacatatgaaatatatt
ggtcatactttatttaatgatgagcgatatggtggaaatgccattttgaaaggaacaact
tttacaaaatacaagcagtttgtagataattgttttaaagttttaccaagacaagcacta
catgcaagaactttaggttttgagcatccaataacaaaagaatttttacgttttgaatgt
gaaattccaaatgatattaaagaatgtatagaaaaatggagagtatattctaaagcccaa
caaatcgaagaataa
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