KEGG   Flavobacterium panici: NLJ00_09275
Entry
NLJ00_09275       CDS       T08520                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
fpb  Flavobacterium panici
Brite
KEGG Orthology (KO) [BR:fpb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fpb03400]
    NLJ00_09275
Enzymes [BR:fpb01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     NLJ00_09275
    5.6.2.6  RNA 3'-5' helicase
     NLJ00_09275
DNA repair and recombination proteins [BR:fpb03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    NLJ00_09275
SSDB
Motif
Pfam: Lhr_WH DEAD_assoc DEAD Helicase_C ResIII NBCH_WD40
Other DBs
NCBI-ProteinID: UUF16298
LinkDB
Position
2116122..2118581
AA seq 819 aa
MNRDELYVLAENWFKSQGWKSFPFQTQTWTAFLQEKNGLLNAPTGSGKTYALWFPVVLDY
IKKNPDYKTKHKPGLKAIWITPLRALSVEIKQAAERIITDLDLPLTVGIRSGDTSQSERA
KQKNKMPDLLITTPESLQLLLASKQYEKTFANCGAIVVDEWHELMGTKRGVQMELALSRL
KTIAPKMRIWGISATIGNLELAQEVLLGHDTEAYKNSVLIKAHINKKIKIESILPEKMET
YPWRGHMGLHLIDEVAKIIRKSKTTLIFTNVRSACEIWFQAILEKYPEFAGEMAMHHGSI
SRETRLWVENAIRNEELKVVVCTSSLDLGVDFAPVETIIQVGGPKGVARFLQRAGRSGHQ
PGKESVIYFLATHAMELIEASALKKAVAQTVVEDRMPYLNSWDVLVQYLNTLAVSDGFFP
DEIYEEVKTTFCYQNITKENWNWILNFITNGSQSLQAYDEFKKVEIEEDGRYKINSRFIA
MHHRMQMGTIVGDAVLNVKFLSGGFIGTVEEWFASKLQRGDVFTFAGRRLELFQIKNMQV
LVRKADPKKTARVVSWMGGRMTLSAQMSELLREELYAANTDHLTPELKALKPIFDRQRKE
SIVPNNDEFLIETFKTREGFHAIFYPFEGRYVHEAMASLISYRISLLSPITFSLAYNDYG
FELLSDQEIDMQSVFDNNLFTTEYVHHDLQKSLNATEMARRKFRDIAVIAGLVFTGMPGK
PVKTKHLQSGSQLLFEVFRDYEPDNLLLQQAYIETFEHQLEEGRLIQAMERINNQTIVWK
QCKKPTPFSFPIITDRLREKISSETLQERIKKMTASYMK
NT seq 2460 nt   +upstreamnt  +downstreamnt
atgaatagggacgaattatatgtattagccgaaaactggtttaaaagccagggttggaaa
tcttttccattccagacacaaacctggactgcttttttgcaggaaaaaaacggtttatta
aacgcgccaaccggaagtgggaaaacctatgctttatggtttcctgtagttctcgattat
attaaaaaaaatcctgattataaaactaaacataaacccggattaaaagcaatctggatt
acgccattacgtgcactatctgtagaaataaaacaagcagcagaacgaattattacagat
ttagatttgccattaactgtcggaattcgttccggagatacttcgcaaagtgaaagagca
aagcagaaaaacaaaatgcccgatcttttaattacaacgcccgaaagtttgcagcttctt
ttagcatcaaaacaatatgaaaaaacctttgccaattgcggtgccattgtagttgacgaa
tggcacgaattaatgggaactaaacgaggcgtgcaaatggaattagcgctttcgagatta
aaaacaattgcaccaaaaatgcgaatttgggggatttcggcaacaataggaaatctcgaa
ttagcacaagaagttttgttaggacatgatacggaagcgtataaaaattccgttttgata
aaagcacatatcaataaaaaaataaagatagaatcgattctgcctgaaaaaatggaaacc
tatccgtggcgcggacacatgggtttacatttgattgatgaggttgcgaaaattatccga
aaaagcaaaacgactttaatttttaccaatgtgcgttctgcctgcgaaatttggtttcag
gctattttagaaaaatatccggaatttgcaggcgaaatggccatgcatcacggcagtatc
agcagagaaactcgtttgtgggttgaaaacgcaattagaaacgaagaattaaaagtcgtg
gtttgtacttcgagtttagatcttggtgtcgattttgcacctgttgaaaccataattcag
gttggcggaccaaaaggagttgcaagatttctgcaaagagcgggacgaagcggacatcag
cctggaaaagaaagtgtgatttactttctcgccacacatgcgatggaattaatcgaagct
tcggcattaaaaaaagcagttgcccaaaccgttgtcgaagaccgaatgccgtatttaaac
agctgggatgttttagtgcaatatttaaatacactcgcagtttctgacggattttttccg
gatgaaatttacgaagaagttaaaacaacattttgttatcaaaatataaccaaagaaaac
tggaactggattttgaatttcataaccaacggaagccagagtttgcaagcttacgatgaa
ttcaaaaaagtagaaattgaagaagacggacgttataaaatcaacagccgttttattgcc
atgcatcacagaatgcaaatgggaacaattgtgggcgacgccgttttgaatgtgaaattt
ttaagtggaggatttattggaactgtggaagaatggtttgcttcaaaattacagcgaggc
gatgtttttacttttgccggaaggcggcttgaattatttcaaattaaaaatatgcaggtt
ttagttcgaaaagccgatcctaaaaaaactgcacgagtggtaagctggatgggaggacga
atgacgttatcggcacaaatgagtgaattgcttcgggaagaattatacgccgcaaacaca
gatcatttaactcccgaattaaaagctttgaaacctatttttgacagacaaagaaaagaa
agtattgtacctaataatgacgaatttttaatagaaacttttaaaacacgcgaaggtttt
catgcgattttttatccttttgaaggccgatatgttcacgaagcaatggctagtttaatt
tcctatagaataagtttattgtcgccaatcactttttcgctggcttataatgattacgga
ttcgaattgctttctgatcaggaaattgatatgcagtctgtttttgataataatttgttt
actacagaatatgttcatcatgacttgcagaaaagcttaaacgcaaccgaaatggcgcgt
cgaaaatttcgtgatattgccgtaatcgcgggtttagtttttaccggaatgcccggaaaa
ccagttaaaacaaaacatttgcaaagtggttcacaattgctttttgaagtttttagggat
tatgaacccgataatttattattacagcaggcttatattgaaacctttgaacatcagtta
gaagaaggacgtttaattcaggccatggaaagaataaataatcagacgattgtctggaaa
caatgcaaaaagccaacgccatttagttttcctataattacagatcgattaagggaaaaa
atatccagcgaaacattacaagaaagaattaaaaaaatgacagcgagttacatgaaataa

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