Flavobacterium panici: NLJ00_14015
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Entry
NLJ00_14015 CDS
T08520
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
fpb
Flavobacterium panici
Pathway
fpb00470
D-Amino acid metabolism
fpb00550
Peptidoglycan biosynthesis
fpb01100
Metabolic pathways
fpb01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
fpb00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NLJ00_14015
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NLJ00_14015
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
NLJ00_14015
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fpb01011
]
NLJ00_14015
Enzymes [BR:
fpb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
NLJ00_14015
Peptidoglycan biosynthesis and degradation proteins [BR:
fpb01011
]
Precursor biosynthesis
Amino acid ligase
NLJ00_14015
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATP-grasp
ATP-grasp_4
CPSase_L_D2
GARS_A
FAM186A_PQQAQ
Motif
Other DBs
NCBI-ProteinID:
UUF12368
LinkDB
All DBs
Position
complement(3274946..3275917)
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AA seq
323 aa
AA seq
DB search
MKNIAIIMGGYSSEYKISLISGNVVYQYLDKTKYNGFRIHIFKEKWVYVDANDAEFPIDR
NDFSVTVNGEKITFDCVFNAIHGTPGEDGLMQAYFELLGIPQSSCDYYQSALTFNKRDLL
SVLKPYGIKTAISYYLNKGDEINTAEIVKKVGLPCFVKPNKAGSSFGISKVKSEAELPIA
IEVAYKEDNEIIIESFLDGTEVSVGVINYKGEVIVLPITEIVSDNDFFDYEAKYEGKSQE
ITPARISDELTKKVGETAKRAYEVLKMKGFSRSEFIIVDNEPYMLEMNTIPGLTTESLIP
QQAKAAGISLEELFTNAIELALA
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacattgccatcatcatgggcggatattcaagcgaatacaaaatctcgcttatc
agcggaaacgttgtttaccaatatcttgacaaaacaaaatacaacggattccgaattcat
atcttcaaagaaaaatgggtttatgtagacgcaaacgacgccgaattcccaattgacaga
aatgatttttctgttacggtaaatggagaaaaaatcacatttgactgtgttttcaacgcc
attcacggaactccgggcgaagatggattaatgcaggcttattttgaattattaggcatt
ccgcaatcatcttgcgattattaccaatcggcattgactttcaataaaagagatttatta
tctgttttaaaaccatacggaatcaaaaccgctatttcttattacttaaataaaggtgac
gaaatcaatacagctgaaatcgttaaaaaagttggcctgccatgtttcgtaaaaccaaac
aaagcgggttcaagttttggaatttcaaaagtaaaaagcgaagctgaacttcctatcgca
attgaagtagcgtataaagaagacaacgaaattattattgaaagtttccttgacggaact
gaagtttctgtaggcgtaattaattacaaaggagaagttatcgttttaccaattaccgaa
attgtatcagacaatgatttcttcgattacgaagctaaatacgaaggaaaatcacaagaa
atcacaccagccagaatctctgacgagttgacaaaaaaagtgggagaaacagcaaaacgt
gcttacgaagttttaaaaatgaaaggattttcaagaagcgaattcatcattgtagacaac
gaaccatacatgctggaaatgaacacaattccgggtttaacaaccgaaagtttgattccg
cagcaagcaaaagcagccggaatttctctggaagaattatttacaaatgcgattgagtta
gctttggcatag
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