Flavobacterium panici: NLJ00_14025
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Entry
NLJ00_14025 CDS
T08520
Name
(GenBank) RluA family pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
fpb
Flavobacterium panici
Brite
KEGG Orthology (KO) [BR:
fpb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fpb03009
]
NLJ00_14025
Enzymes [BR:
fpb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
NLJ00_14025
Ribosome biogenesis [BR:
fpb03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NLJ00_14025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
UUF12370
LinkDB
All DBs
Position
3276777..3277823
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AA seq
348 aa
AA seq
DB search
MNNNIEENLDLEDELFEHYRFEVPKGQAFLRIDKYLLNLIQNATRNKIQNAASDGNIFVN
DIPVKSNYKVKPFDVITVMLSHPPYENHILPEDLPINIVYEDDAFLLINKEPGMVVHPGH
GNYTGTLVNALAHHFDNLPMNSSERPGLVHRIDKDTSGLLVVAKTEAAMTHLAKQFEAKT
TEREYIALVWGNVAAESGTIEGNLARHLKDRMQMAVFADPEIGKPAITHYKVLERFGYVT
LISCKLETGRTHQIRAHMKHIGHPLFNDERYGGHLILKGTTFTKYKQFIENCFKALPRQA
LHAKTLGFVHPNTGEMMRFDTELPQDFQDCIEKWRTYVKSHNTEDEEN
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgaacaataatattgaagaaaatttagatctggaagacgaattattcgaacattacaga
tttgaagtaccaaaaggtcaggcgtttttacgtattgataaatatttgctgaatttgatt
cagaatgctacgcgtaacaaaattcagaacgcagcatctgacggaaatatttttgtaaat
gatattccggtaaaatcaaactataaagtaaaaccttttgatgtgattacggttatgtta
tcgcatccgccgtatgaaaaccatattctgccggaagatcttccgattaatattgtgtat
gaagatgacgcctttttattaatcaataaagagccgggaatggtggtgcatccgggtcac
ggaaattatacgggaactcttgtaaatgctttggcacatcattttgataatctgccaatg
aacagcagtgagcgtcctggtttagtgcatagaattgataaagatacttctggacttttg
gttgttgccaaaacagaagcggcaatgacgcatttggcaaaacaatttgaagctaaaact
acagaacgtgaatatattgcccttgtgtggggaaatgttgctgcagaaagcggaacaatt
gaaggaaaccttgccagacatttaaaagaccgcatgcaaatggcggtttttgctgatcca
gaaataggtaaaccggcaattacacattataaagttttagagcgttttggttatgtgact
ttgatttcctgcaaactggaaactggaagaacacaccaaattcgtgcgcacatgaaacat
atcggacatccgttatttaatgacgaacgttacggcggacatttgattttaaaaggaact
acgtttacaaaatacaaacagtttatagagaattgttttaaagcattgccgcgtcaggcg
ctgcatgctaaaacgcttggattcgttcacccaaatacgggcgaaatgatgcgttttgat
acagagttaccgcaggattttcaggattgtattgaaaaatggcgcacgtatgtgaagtca
cataatacggaagatgaggagaattaa
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