Francisella philomiragia O#319-029: BF30_125
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Entry
BF30_125 CDS
T03617
Symbol
uvrC
Name
(GenBank) excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
fpi
Francisella philomiragia O#319-029
Pathway
fpi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fpi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BF30_125 (uvrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpi03400
]
BF30_125 (uvrC)
DNA repair and recombination proteins [BR:
fpi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BF30_125 (uvrC)
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Ortholog
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GFIT
Motif
Pfam:
UvrC_RNaseH_dom
GIY-YIG
UVR
HHH_5
HHH_2
DUF4709
Motif
Other DBs
NCBI-ProteinID:
AJI47805
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Position
complement(117912..119750)
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AA seq
612 aa
AA seq
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MIADNSKDFDLKSFLANLTTHSGVYRMLDKHGEIIYVGKAKNLKNRVNSYFSKGAKDSKT
LMMVEQVARIEITIAPSDYEAYLLENNLIKQHRPKYNILFKDDKSYPYLVISRDKFPRVS
FYRGKSAYKKGQCFGPYVSISSVKNTLNIIQKIFPIRQCENSYYKSRVRPCLQYQIKRCL
APCVGLVSQEQYDEQLAILKKFLAGKFSSVLEEISAKMYQASEDMEYEKAQVYRDQLVIL
RKLQQQQIVDIQEDKTFDVIGIYMQDSYASIALLQIQNGDVVADRHWSIDAKGQDKTSIM
HAFLSHFYLGDEIRNIWPKNIILSKVEFADITDLMNSISQKIGQAINWIVAPAADNLKWL
KLAEVNARQKLNIYTSSKSQYQKRLESLKEFLELEKDIKRIECFDISHFQGEATIASCVV
YTDEGEDRKSHRRYNIKDIKAGDDYAAIHQAVSRRVSSGLEADNLPDVMIIDGGKGQIHQ
AEAVFREYGIQDKVQLVSLGKGVERISGKEKIYKGFDDTEYTLDEHNPGFLLLRQVRDSA
HDHAIKGQRKKVSANRQSSIIEEIEGVGPKRRKALIMYFGGWQELSRAFVDEIAKVKGIS
NKLAQEIWECFH
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgattgcggataattctaaagattttgatttaaaaagtttcttggctaacttaaccaca
cattctggtgtttatcgtatgcttgataagcacggagagataatctatgtcggtaaagca
aagaatctcaaaaatcgggtgaatagttatttttctaaaggcgcgaaagatagtaaaact
ctaatgatggtagagcaggtggctcgaattgagataactattgctcctagtgattatgaa
gcatatttgttagaaaataatctcattaagcaacatcgccctaaatataatattttattt
aaagatgataaaagttatccatacctagtaatttctcgtgataaatttcctagagtatct
ttttatcgtggtaaatcagcatataaaaaaggtcaatgttttggaccttatgtatctata
tcatcagttaagaatactctaaatataatccaaaaaatctttccaattcgtcagtgtgaa
aactcttactataagtctagggttaggccatgtttgcaatatcaaattaaacgctgtcta
gcaccatgtgtaggcttggtttctcaagagcaatatgatgaacagctagctattttgaag
aagtttttagcggggaagtttagtagtgttttagaagaaatttcagctaaaatgtatcag
gcttctgaagatatggagtatgaaaaggctcaagtatatcgcgaccagttagtgatatta
cgcaaactacagcagcagcaaatagtcgatattcaagaagataaaacatttgatgtaatc
ggtatctatatgcaagatagctatgcaagtatagccttattacaaattcaaaatggtgat
gttgtcgcagatagacattggagtatagatgccaaagggcaggataaaacctccatcatg
catgcttttttatctcatttttatttaggtgatgaaattcgcaatatttggcctaaaaat
ataatcctatcaaaagttgagtttgctgatattactgatcttatgaatagtatctctcaa
aaaattggtcaagccataaattggatagttgcaccagctgctgacaatctcaagtggttg
aaattagctgaggtaaatgcacgacaaaagttaaacatctacacaagttcaaaatctcag
tatcaaaaacgcttagaatcactcaaagaatttcttgagttagaaaaagatattaagcgt
attgagtgttttgatatttcacatttccaaggtgaggcaactatagcgtcatgtgtagta
tatacagatgagggtgaagatcgtaaatctcatcgcagatacaatatcaaagatatcaag
gctggtgatgactatgcagcaattcatcaagcagtatcgcgtcgagttagttcaggatta
gaagctgataatcttcctgatgttatgataatagatggcggtaaagggcagattcatcaa
gcagaagcagtttttagagagtatggaattcaagataaagtccagcttgtaagtttgggt
aaaggtgttgagcgtataagtggtaaagaaaaaatctacaaaggttttgatgataccgaa
tatacattagatgaacacaatccagggtttttattattacgacaagttagggactctgct
catgatcatgcaattaagggtcagcgtaaaaaagtaagtgcaaatagacaatcatcaatt
attgaagaaatagaaggcgttggaccaaaacgccgtaaagctttgataatgtattttgga
ggctggcaagaactatctagagcatttgttgatgagattgcaaaggttaaaggaattagt
aacaaattagctcaggaaatatgggagtgctttcattaa
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