Flavonifractor plautii: A4U99_00995
Help
Entry
A4U99_00995 CDS
T04429
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
fpla
Flavonifractor plautii
Pathway
fpla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fpla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A4U99_00995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fpla03019
]
A4U99_00995
03009 Ribosome biogenesis [BR:
fpla03009
]
A4U99_00995
Enzymes [BR:
fpla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A4U99_00995
Messenger RNA biogenesis [BR:
fpla03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A4U99_00995
Ribosome biogenesis [BR:
fpla03009
]
Prokaryotic type
rRNA helicases
A4U99_00995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
AAA_22
CMS1
AAA_19
Motif
Other DBs
NCBI-ProteinID:
ANU39714
UniProt:
A0A174LS21
LinkDB
All DBs
Position
222023..223207
Genome browser
AA seq
394 aa
AA seq
DB search
MEINGEQVNGTKTYAELGLSEAIMRAIEKKGYVQATPVQAGAIPYFMEWKDVIAKAPTGT
GKTFAFGIPMVEHIDPECADVQGLVLAPTRELAVQIQEELRDLCEFKEGVRTVCLYGGAP
IDRQINTLKKKPQIVVATPGRLMDHMKRRTVRLDKVQTVVLDEADRMLDMGFVRDVTRIL
DQLKHRRNLGMFSATISREVMDISWVYQRDPVEITVRPVEESKPDITQYRIDLDGREQKL
DTIAALITHGEYERAIAFCNTKNMTDRLAGLLKMRGISCEAIHGDIQQRIREKTLEKFKR
GEIKVLVATDVAARGLDIDDVDAVFNYDVPDELENYTHRIGRTGRAKRHGVAYTFIATIT
EGIRMDDIVRNTKAEVQRLRYDADGCLMLVEDGK
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaacggcgagcaggtgaacgggaccaaaacctacgcggagctggggctgtcc
gaggccatcatgagggccattgaaaagaagggctatgtccaggccacccccgtccaggcg
ggggcgatcccctatttcatggagtggaaggatgtcattgccaaggcccccaccggcacg
ggcaagacctttgccttcggcatccccatggtggagcacatcgacccggagtgcgccgac
gtgcagggcctggtgctggcccccacccgggagctggcggtgcagatccaggaggagctg
cgggatctgtgcgagttcaaggagggggtgcgcaccgtctgcctctacggcggggccccc
atcgacaggcagatcaacaccctgaaaaagaagccccagatcgtggtggccacccccggc
cgcctcatggaccacatgaagcgccgcaccgtccggctggacaaggtgcagaccgtggtg
ctggacgaggccgaccggatgctggacatgggcttcgtgcgggacgtgacccgtatcctg
gatcagctcaagcaccgcagaaacctgggcatgttttccgccaccatcagccgggaggtc
atggacatctcctgggtgtaccagcgggacccggtggagatcaccgtccgcccggtggag
gagtccaagccggacatcacccagtaccgcattgatctggacggccgggagcagaagctg
gacaccatcgcggccctcatcacccacggggagtacgagcgggccatcgccttctgcaac
accaagaacatgaccgaccggctggccggcctgctgaagatgcggggcatctcctgcgag
gccatccacggcgacattcagcagcgcatccgggagaagaccctggagaagttcaagcgg
ggcgagatcaaggtgctggtggccaccgacgtggccgcccggggcctggacatcgacgac
gtggacgcggtgttcaactacgacgtgcccgacgagctggagaactacacccaccgcatc
ggccgcaccggccgggccaagcgccacggcgtggcctacaccttcatcgccaccatcacc
gagggcatccgcatggacgatatcgtgcgcaacaccaaggcggaggtgcagcggctcaga
tacgacgccgacggctgcctcatgctggtggaggacggcaaataa
DBGET
integrated database retrieval system
