Flavobacterium psychrophilum JIP02/86: FP2249
Help
Entry
FP2249 CDS
T00548
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor RpoN
KO
K03092
RNA polymerase sigma-54 factor
Organism
fps
Flavobacterium psychrophilum JIP02/86
Pathway
fps02020
Two-component system
fps02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
fps00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FP2249 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
FP2249 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fps03021
]
FP2249 (rpoN)
Transcription machinery [BR:
fps03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FP2249 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
LacI
SF3b1
MarR
HTH_Crp_2
HTH_12
Crp
Motif
Other DBs
NCBI-ProteinID:
CAL44305
UniProt:
A6H1T1
LinkDB
All DBs
Position
complement(2587162..2588628)
Genome browser
AA seq
488 aa
AA seq
DB search
MLKQFLNFKLSQKLSPQQIQLMKLIQLPTQAFEARLLEEMNENPALEGGDDQEEIYEKDE
FDNNDDYDEYEDNDSIDSGDINIDEYLSNDETPDYKTQANNYSDDDDERESPLSAPVSFH
QDLINQLNTFILTDDQRNIAEFLVGSIDDMGYIRRTIQDIVDDMAFTQGIYTDEKTVEKI
LHIVHELEPSGVGARDLQECLLLQLKHKTPTESVALAMNIIQDQFEAFTKKHYDKLMLKF
SVSREQLKNGIDEIERLNPKPGGAYTGSNKITEHVVPDFAIKIIDDELELTLNGRNAPEL
HVSKDYQDMMKTYKDSKDKSNAQKDAVQFIKQKLDSAKWFIDAIKQRQETLYVTMNAIMH
FQQEYFLDGDEANLKPMILKDIADMIGLDISTVSRVANSKYVDTPYGTKLIKEFFSEAMT
NDQGEEVSTIEIKNILQTVIAEEDKNKPLPDDQLAEILKEKGYPIARRTIAKYREQLDIP
VARMRKKM
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagcagtttctaaatttcaaattatctcaaaaattatctccacaacaaattcag
ttgatgaagctaattcaattgcctacccaagcttttgaagcccgtttgttagaagaaatg
aacgaaaatcctgcattagaaggcggtgatgaccaagaagaaatttacgaaaaagatgag
tttgataataatgacgattacgatgagtatgaagacaatgatagcatagattctggcgac
ataaatatagacgagtatttaagtaacgacgaaacgccagattacaaaacacaagccaat
aattatagcgatgatgatgatgaaagagaatcaccattatcggcaccagttagttttcat
caagatttaattaatcaactaaacacctttattttaacagacgatcagcgtaatattgcc
gaatttcttgtgggaagtatcgatgatatggggtatataagacgtacaatacaagatatt
gtagatgatatggcgtttacccaaggtatttataccgatgaaaaaacggtcgaaaaaata
ttgcatattgttcacgaattagaaccatctggcgtaggcgcaagagatttgcaagagtgc
ttgttgcttcaattgaagcacaaaacgcctacggaatctgttgcattagcgatgaatatt
attcaagatcagtttgaagcttttactaaaaagcattatgacaaattgatgttaaagttt
tcagtttctcgagaacaactcaaaaacggaatcgacgaaattgaaaggttaaacccaaaa
ccaggaggcgcttataccggaagcaacaaaataaccgaacacgtggttcctgattttgct
ataaaaattattgatgacgaattagaactaaccttaaacggaagaaatgcacccgaactt
catgtttcgaaagattatcaagacatgatgaaaacctataaggattctaaagacaaatcg
aacgcacagaaagatgccgttcagtttatcaaacaaaaattagattctgcaaaatggttt
atcgatgcaataaaacaacgtcaggaaacattatatgttacaatgaatgccatcatgcat
tttcaacaagagtattttcttgatggtgatgaggctaacttaaaaccaatgattcttaag
gatattgccgatatgataggattagacatttcaactgtttcccgtgtggcaaacagcaaa
tatgtagatacaccttatggtacaaagctaattaaagagttttttagtgaagccatgaca
aatgaccaaggcgaagaagtttcgactatagaaattaaaaatattcttcaaacagttatt
gcagaagaagacaagaacaagccgctaccagacgaccaattggcagaaatattaaaagaa
aaaggctatcctattgcccgaagaaccattgctaaatatcgtgaacagttagatattcct
gtggcgagaatgagaaaaaaaatgtaa
DBGET
integrated database retrieval system
