Flavobacterium psychrophilum Z2: AMR72_04745
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Entry
AMR72_04745 CDS
T04556
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
fpsz
Flavobacterium psychrophilum Z2
Brite
KEGG Orthology (KO) [BR:
fpsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fpsz03032
]
AMR72_04745 (gyrB)
03400 DNA repair and recombination proteins [BR:
fpsz03400
]
AMR72_04745 (gyrB)
Enzymes [BR:
fpsz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
AMR72_04745 (gyrB)
DNA replication proteins [BR:
fpsz03032
]
Prokaryotic type
DNA Topoisomerases
AMR72_04745 (gyrB)
DNA repair and recombination proteins [BR:
fpsz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AMR72_04745 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
ALM48266
LinkDB
All DBs
Position
complement(1098519..1100459)
Genome browser
AA seq
646 aa
AA seq
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MSEEIKKNNYSADSIQALEGMEHVRMRPSMYIGDVGTRGLHHLVYEVVDNSIDEALAGHC
DTIYVAINEDNSVTVEDNGRGIPVDLHKKEGVSALEVVMTKIGAGGKFDKDSYKVSGGLH
GVGVSCVNALSDHLRATVFREGKIYEQEYEKGKAIYPVKQIGETEKRGTMVTFRPDSTIF
TQTTEYSYDTLAARMRELSFLNKGISITLVDKREKDDKGEFLSETFHSQEGLKEFVKFLD
GNREPIIAHVISMETDKGEVPVEVALIYNTSYSENIFSYVNNINTHEGGTHLSGFRRGLT
NTLKKYADNSGLLEKLKFEISGDDFREGLTAIISVKVSEPQFEGQTKTKLGNREVVAPVS
QAVSEMLENYLEENPNDARIIVQKVILAAQARHAAKKAREMVQRKTVMGGGGLPGKLSDC
SEQDPAKCEVFLVEGDSAGGTAKQGRDRAFQAILPLRGKILNVEKAMHHKVFENEEIRNI
FTALGVTIGTAEDSKALNLEKLRYHKVVIMCDADVDGSHIATLILTFFFRFMKELIENGH
VYIATPPLYMVKKGNKKEYAWNDVQRDQATERLGNGSAIQRYKGLGEMNAEQLWETTLDP
EFRTLRQVNIDSLAEADRVFSMLMGDEVPPRREFIEKNAVYAKIDA
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagaaataaagaaaaacaattattcggcagacagtattcaggcccttgaaggt
atggagcacgtaaggatgcgtccttccatgtacattggcgatgtgggtacaagaggtctt
caccaccttgtttatgaggtagtagataactcgattgacgaggctcttgccggacattgt
gatactatttatgttgccattaatgaagataattcggttaccgttgaagataatggccgt
ggtataccggtagatttacataaaaaagaaggtgtttctgcgcttgaggttgtaatgacc
aaaattggtgccggaggtaagtttgataaagattcctataaagtttcgggtggtttgcac
ggggtaggtgtatcgtgtgtaaatgcactatcggaccatcttagggctactgtttttaga
gaaggtaaaatatacgaacaggaatacgaaaaaggtaaagcgatttatcctgtaaaacag
ataggtgaaacagagaaaaggggtactatggtgacctttaggcctgatagcacgatcttt
acacaaactacagagtattcttatgatacccttgcagcacgtatgcgtgagctttctttc
cttaacaaaggaataagcattacacttgttgataaaagggagaaagatgataaaggggaa
tttctttctgaaactttccattctcaggaaggtcttaaagaattcgttaagtttcttgat
ggtaaccgtgagcctattattgctcatgtaataagtatggagactgataaaggtgaagta
cctgttgaggttgcacttatctacaacacaagttactcagagaatattttctcttatgta
aataatattaatacacatgagggtggtacacacctttcgggcttccgaagaggtcttacc
aatactcttaaaaaatatgccgataattccgggcttcttgaaaaactgaagtttgagatt
tccggcgatgacttccgtgaaggtcttacggctattatctcggtaaaggtttctgagcct
cagtttgagggacagacaaaaaccaaactgggtaaccgtgaggttgtagctcctgtaagc
caggcggtaagtgaaatgcttgaaaattatcttgaggagaaccctaatgatgcgcgtatc
attgtgcaaaaggttatccttgcggcgcaggcacgtcatgcagctaaaaaagcgcgtgaa
atggtgcagcgtaaaaccgtaatgggtggcggaggacttccgggtaaactttctgactgt
tctgagcaggatcctgcaaaatgcgaagtattccttgtagagggtgactcggcgggtggt
actgcaaaacagggacgtgacagggcttttcaggcaattcttccactaaggggtaaaatc
cttaatgttgaaaaagctatgcaccataaggtttttgaaaacgaagagattcgtaatata
tttactgcgcttggtgttaccattggtactgctgaagacagtaaagcgcttaaccttgaa
aagctgcgctatcataaggtagttattatgtgtgatgccgatgttgatggttctcacatt
gctacgcttatccttacgttcttcttccgtttcatgaaagagcttatagagaacggccac
gtttatattgctaccccgccattatatatggttaagaaaggtaacaagaaagaatatgcg
tggaacgatgttcagcgtgaccaggctacagaaagactgggtaatggttctgcgatacaa
cgttataaaggtcttggagagatgaatgctgagcagctttgggaaacaacactggatcct
gaattccgtacgcttcgtcaggttaatatcgatagtttagccgaggctgacagggtgttc
tctatgcttatgggggatgaagttccaccaaggagagagttcattgaaaagaacgctgtt
tatgctaagattgacgcgtaa
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