Frankia casuarinae: Francci3_2981
Help
Entry
Francci3_2981 CDS
T00320
Name
(GenBank) beta-ketoacyl synthase
Organism
fra
Frankia casuarinae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ketoacyl-synt
Acyl_transf_1
KR
Ketoacyl-synt_C
Thioesterase
PP-binding
KAsynt_C_assoc
adh_short
Thiolase_N
adh_short_C2
Epimerase
Abhydrolase_3
Polysacc_synt_2
GDP_Man_Dehyd
Hydrolase_4
NAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
ABD12338
RhizoBase:
Francci3_2981
UniProt:
Q2J8Q4
LinkDB
All DBs
Position
3525223..3531468
Genome browser
AA seq
2081 aa
AA seq
DB search
MRDTREIQARSPRGTGGGASEAWRLRLTGRSETAQRELLLDLIAGRVAVLTERSGDAAIL
GRESSWRGLGVYRGIADRLRDELSAATGLRLPATLLFDRPSPEALADHLRRELLGIDEPA
AVPAAVPAAVPPATAVPATGEVGSEPFRGHDPVVIIGMACRLPGGVDSPQALWDLVREGR
DAVGGLPDDRGWDLDALYDPDPDQPGTAYTRHGGFLPGIALFDPGFFGIGPREAHAVDPQ
QRLMLEISWEVLEHAGIDPRSLRGSRTGVFTGVSLQDYGPAWHAAPAEAQGQLLTGNASG
VIAGRVSYTLGLEGPALTIDTQCSSSLVAVHLAGHALRAGECDLALAGGVTVMSTPGILV
EFSRKRGLASDGRCKAFSADADGTGWADGAGVLLLERLSDAHRNGHHVLAVLRGTAINQD
GASNGMTAPNGLSQQRLIRQALANAGLRAADVDAVEAHGTGTTLGDPIEAQAVIATYGQD
RAARRPVYLGSLKSNIGHTQAAAGVAGIIKMVQAMRHGVLPRTLHVREASPHVDWSAGDV
ALLTGNVPWQRRDGRPRRAAVSAFGVSGTNAHAVIEEAPPGPGTDAMGADRAGENPASAP
VPVVLSGRCDAALRSAAARLGAHLERHPEISPLDAGYTMAGRTHFEHRAVAVVRGSAACG
SGTHLTGTGTLTGTLAALAEARPSAGLVLGTVRPALRRSGTARGATAFLFTGQGSQRPGM
GRELHATYPVFANALDDVCAHFAPHLEHPLRDVMFAPAGSPGAAALDRTEYTQPALFAFE
TALFRLLESWGLAPGILAGHSIGELTAAHVAGVWTLDDACALVAARGRLMQACRAGGAMT
AIRAGEAEVAESLAGLAGRVEIATVNGPSATVIAGDADLVERVAVGWAERGRAIRRLTVS
HAFHSPHMDDMLDRFRAVAEKITYSPPAIPVVSTRTGDLDLQAGLTTPDHWVRHVREPVR
FLDAARRLHREGAVAYLELGPDAVLTALLPACLAADAQRTEKTQRTQSTQSTRDAQNTRD
ARDTVAAAASRAGRPEPDTLLTALAELHVHGVDVDWRALYRGRGARHRELPTYPFQRRRY
WLDGTTAVPAPRSPTVGTARAADPDGWSYRTEWRPLDSEDVTTAVTAQAIAVTAQATATP
PLSGVWPVLTPAAAVDEDMLSRICWIIERLGGTAVTLTLTGDDADRARVAALLSNAIPLP
DAIPPSGAIPPSGGGPAGKKTVQAVRGVLSLLALDDTPHRIHPALTTGLALTVPLVQALH
DLDVSAPLWCVTRGAVTTGPDDPVTTPDQAMMWGLGRALALEDPDAWGGLIDIPTNLDDQ
TLAWFGSALTAPGSEDQLAARATGLLVPRLVRADTVGAADNTVGAPTDTVPPAWRPHGTV
LITGGTGALGAHAARRLARDGARRIVLVSRRGPAAAGAEDLRAELAALGAEATIEACDVG
EHEQLAALLRRLAKAGRPVSAVVHAAGVMGQVTALHKLDLGEFAEVVAGKVAGAAGLDRL
LDGTGGITGTSDTSDTDGITGTSDTSGTRLEAFVLFSSVSATWGSGGQAAYSAGNAYLDA
LAARRHALGLAATSVAFGPWADAGMGAEATFRDYLGRRGLTPLPPDAAVTALTRAVAGGQ
AALTVADVDWERFLPPFTAARPGRFFDDLWSRSTTAGPEGDADPTGTDAPPARVDYGTLP
GPARARALFDLVRAEAAAILGYPSPDDVDPQRRFLELGFDSLASVQLSRRLAAATGLTLA
TPVVFEHPTVCELTRHLDTLATLATLATQRHPDIVPGGPPARAGTQVAPIGVRELYRQAC
TDGKFAEGVGVLRAAARLRPVFRTVEAFGAPAAPVRLASGPARPTIVCLPSMVAPSGPHN
FARLALHLHGRRDVYALPHPGFGDGELLPATADLVVDLHAETIARAFDEIPLVLAGYSSG
GWLAHAIAARLETRGIHPRAVVLLDTWLPGDRIPEGDIQEELRGVALNDQAFALMTEAQV
TAQGAYLDLFEGWRPTAVNAPVVLVRAMERMPQQAVAENPDGEGQAWVTDWVMEHERLDA
AGNHQTMMNEHAASTAAVLHQWLTELERPTELERPTELERR
NT seq
6246 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatacgcgcgaaatccaggcacgatcgccgcgcggcaccggtggtggggcgagc
gaggcgtggcgtctgcggctgaccggccgatcggagacggcccagcgcgagctcctgctg
gacctgatagccggccgggtcgccgtgctgaccgagcgcagcggcgacgcggccatcctc
ggccgggagtcctcctggcgtggtctcggggtgtaccgcggcatcgccgatcggctgcga
gacgaactgtccgctgcgacgggtctgcgcctgcccgcgacgctgttgttcgaccggccc
tcccccgaggccctcgccgaccatctgcgccgtgagttgctgggtatcgacgagcccgcc
gccgtccccgccgccgtccccgcggccgtcccgccggccaccgccgttcctgccaccggc
gaggtcggctcggagccgttccggggccatgatcccgtagtcatcatcggcatggcctgc
cggctgcccggcggcgtcgactcaccgcaagccctgtgggacctggtgcgagagggccgg
gatgccgtcggcggcctgcccgacgaccggggctgggacctcgacgcgctctacgaccct
gatcccgatcagcctggcaccgcctacacccgccatggcgggttcctgcccggcatcgcg
ctgttcgacccgggattcttcggtatcggtccgcgcgaggcacatgccgtggacccgcag
cagcggctgatgctggagatctcctgggaggtgctggagcacgcgggcatcgacccacgg
tcgctgcggggcagccggaccggcgtcttcaccggggtgtcgctgcaggactacggcccc
gcctggcatgcggcgcccgccgaagcccagggacaactactcaccggcaacgcctccggc
gtgatcgccggccgcgtctcctacacgcttggcctggaagggcccgcgttgaccatcgac
acccagtgttcctcgtccctggtggcggtgcatctggccggccatgcgctgcgggccggc
gaatgcgacctcgccttggccggtggggtgaccgtgatgtcgaccccagggatcctggtg
gagttcagccgcaagcggggcctggcgtcggacgggcggtgcaaggcgttctccgccgac
gccgacggcaccggctgggccgacggcgcgggcgtgctgctgctggaacggctctccgac
gcccaccgtaacggccatcacgtcctcgcggtcctgcgtggcaccgcgatcaaccaggac
ggcgccagcaacgggatgaccgcgccgaacggcctgtcccagcagcgcctgatccgccag
gcgctggccaacgccgggctgcgcgccgccgacgtcgacgcggtggaggcgcacggcacc
ggcacgacgctcggtgacccgatcgaggcccaggccgtcattgccacctacggccaggac
cgtgcggcacggcggcccgtctacctcgggtccctgaagtcgaacatcggccacacccag
gccgccgccggcgtcgccgggatcatcaagatggtgcaggcgatgcggcacggcgtcctg
ccgcggaccctgcacgtgcgcgaggcgtccccgcacgtggactggtcggcgggcgacgtc
gccctgctcactggaaacgtcccctggcagcgccgggacggccggccgcgacgggcggcg
gtgtcggcgttcggggtaagcggcaccaacgctcacgccgtgatcgaggaagcaccaccc
gggccgggaacggacgccatgggtgcggaccgcgccggagagaacccggcgagcgccccg
gtgcctgtcgtcctgtccggccgctgcgacgcggcgctacgttcggcggccgcccggctc
ggcgcgcacctggagcgccatcccgagatctctcccctggacgcgggatacaccatggcg
ggtcgcacccacttcgagcaccgtgccgtcgccgtcgtccgcggatcggcggcgtgcggc
agcggcacacacctgaccgggaccgggaccctgaccgggaccctggctgctctggccgag
gcccgtcccagcgccgggctggtcctgggcacggtccgaccagcgctccgccgaagcgga
accgcccggggggcaaccgccttcctgttcaccggccagggcagccaacgccccgggatg
ggccgcgaactccatgcgacctacccggtcttcgccaacgccctcgacgacgtctgtgcc
cactttgcgccgcatctcgaacacccactgcgcgacgtcatgttcgcccccgccggttcc
ccgggcgcggcggcgctcgaccgcaccgagtacacccagcccgcgctgttcgccttcgag
accgcgctgttccggctcctcgaatcctggggtctcgccccggggatcctcgccgggcac
tccatcggcgagctcaccgccgcccacgtcgccggagtgtggaccctcgacgacgcctgc
gctctcgtcgcggcccgcggccggctcatgcaggcctgccgcgccggcggagccatgacc
gccatccgcgccggcgaggcggaggtcgccgagtccctcgccggactcgccgggcgggtc
gagatcgccaccgtcaacggcccgagcgccaccgtcatcgccggcgacgccgacctcgtc
gaacgcgtcgccgtcggctgggccgagcgcggccgcgccatcaggcggctgacggtcagc
cacgcctttcactccccgcacatggacgacatgctcgaccggttccgagccgtcgccgag
aagatcacctactccccgccggccatccccgtcgtctccacccggaccggcgacctcgac
ctccaggccgggctcaccacccccgaccactgggtacgccacgtccgcgaacccgtccgt
ttcctcgacgccgcccgtcgcctgcaccgcgaaggcgccgtcgcctacctcgaactcggt
cccgacgccgtcctgaccgcgctcctgccggcctgcctagccgccgacgcccagcgcacc
gagaagacccagcgcacccaaagcacccaaagcacccgggacgcccagaacacccgcgac
gcccgggacacggtggccgcggcggcgtcccgcgccggccgccccgaacccgacaccctc
ctcaccgccctggctgagctgcacgtccacggcgtcgacgtcgactggcgcgccctgtac
cggggacgcggcgcccggcaccgggagctgcccacctacccgttccagcgcaggcgctac
tggctcgacgggaccaccgctgtccccgcgccccgtagcccgaccgtcgggacggcccgc
gcggcggacccggacggctggtcttaccgcaccgagtggcggcccctggactccgaggac
gtcaccaccgccgtgacggcccaggccatcgccgtgacggcccaggccaccgcgacgcca
ccgctgtccggcgtgtggccggtgctgaccccggccgccgccgtcgacgaggacatgctc
tcccgcatctgctggatcatcgaacgcctcggcggcacggccgtcaccctcaccctcacc
ggcgacgacgccgaccgcgcccgggtcgcggcgctgctgtcgaacgccataccgctgccc
gacgccataccgccgtcgggcgccataccgccgtcgggcggcggccccgccgggaagaag
acggtgcaggcggtacgcggcgtcctgtccctgctcgccctcgacgacacgccgcaccgc
atccatccggcgctgaccaccgggctcgccctcaccgtcccgctcgtccaggcgctacac
gacctcgacgtgtccgcaccgctgtggtgcgtcacccgcggcgcggtcaccaccggtccc
gacgaccccgtcaccaccccggaccaggccatgatgtggggactcggccgcgccctcgcc
ctggaggaccccgacgcctggggcggtctgatcgacatcccgaccaacctcgacgatcag
acgctggcgtggttcggctccgccctcaccgcccccggtagcgaggaccagctcgccgcc
cgtgccaccgggctgttggtaccccgcctcgtcagagccgacaccgtcggtgcagcagac
aacaccgtcggtgcaccgaccgacaccgtcccgccagcgtggcggcctcacggcacggtc
ctgatcaccggtggcaccggcgccctcggcgcgcatgccgcccgccggctcgcccgcgac
ggtgcgcgccggatcgtcctcgtcagccgccgtggccccgcggctgcgggggcggaggac
ctacgcgccgaactcgccgccctcggcgccgaggcgaccatcgaggcctgcgacgtggga
gagcacgaacagctcgccgccctgctgcggagactggccaaggcgggccggccggtgtcc
gccgtcgtgcacgcggccggtgtcatggggcaggtgaccgccctacacaaactcgatctc
ggggagttcgcggaggtcgtggccgggaaggtcgccggcgccgccggcctcgaccggcta
ctcgacggcaccggcgggatcaccggcaccagcgacaccagcgacaccgacgggatcacc
ggcaccagcgacaccagcggcaccaggctggaggccttcgtcctgttctcgtcggtgtcg
gcgacctggggcagtggcggccaggccgcctacagcgcgggcaacgcctacctcgacgcc
ctcgccgcgcggcggcacgcgcttggtctcgccgccacctctgtcgcgttcggcccgtgg
gccgatgccggaatgggcgccgaggccacgttccgtgactacctgggccgccgtggcctg
accccgctgccccccgacgcggcggtcaccgcgctcacccgggcggtcgcgggcgggcag
gccgcgctcaccgtcgccgacgtcgactgggagcgcttcctcccacccttcaccgccgcc
cgccccgggcgtttcttcgacgatctatggagccggtccacgacggccggacccgagggg
gacgccgacccgaccggcaccgacgcgccccccgcccgggtggactacgggacgctgccc
gggcctgcccgcgcccgcgcgctgttcgacctcgtgcgggcggaggccgcggccatcctc
gggtacccgtcgcccgacgacgtggacccgcagcgccgcttcctcgaactcggcttcgac
tcactggcctcggttcagctcagccgccgactggccgccgccaccggcctcaccctggcc
acgcccgtcgtcttcgagcatccgacggtctgcgagctcacccgccatctcgataccctt
gccacccttgccaccctcgccacccagcggcacccggacatcgtgcccggcggacccccc
gcgcgggccgggacgcaggtcgcgccgatcggcgtgcgcgagctgtaccggcaggcgtgc
acggacggcaagttcgccgagggcgtcggtgtcctgcgggccgccgcccggctcaggccc
gtcttccgcaccgtcgaggccttcggcgcgcccgccgcgccggtgagactcgcctcgggt
ccggccaggcccaccatcgtctgcctgccctcgatggttgccccgtcgggaccgcacaac
ttcgcccgcctcgccctgcacctgcatggccggcgggacgtgtacgcgctgccgcatccc
ggattcggcgacggggagctgcttccggccaccgcggatctcgtcgtcgacctgcatgcc
gagaccatcgcccgggcgttcgacgagatccccctcgtgctagcgggttactcctcgggt
ggctggctggcacatgcgatcgcggcccggctggagacccgcgggatccaccccagggcg
gtggtgctgctcgacacgtggctgcccggggaccgcatccccgagggtgacatccaggag
gagcttcgcggcgtcgccctcaacgaccaggccttcgcgctgatgacggaggcacaggtc
accgcgcagggcgcctacctggacctgttcgagggctggcggccgaccgccgtcaacgcg
ccggtcgtcctcgtccgggcgatggagcgcatgccccagcaggcggtcgccgagaacccc
gacggggagggccaggcctgggtgaccgactgggtgatggagcacgaaaggctcgacgcc
gccggcaatcaccagacgatgatgaacgaacacgccgcctccaccgccgcggtcctccac
cagtggctcacagaactggagcggcccacggaactggagcggcccacagaactggagcgg
cgctga
DBGET
integrated database retrieval system
