Frankia casuarinae: Francci3_3514
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Entry
Francci3_3514 CDS
T00320
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
fra
Frankia casuarinae
Pathway
fra00300
Lysine biosynthesis
fra00470
D-Amino acid metabolism
fra01100
Metabolic pathways
fra01110
Biosynthesis of secondary metabolites
fra01120
Microbial metabolism in diverse environments
fra01230
Biosynthesis of amino acids
Module
fra_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
fra00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Francci3_3514
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Francci3_3514
Enzymes [BR:
fra01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
Francci3_3514
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
ABD12867
RhizoBase:
Francci3_3514
UniProt:
Q2J775
LinkDB
All DBs
Position
complement(4198069..4198977)
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AA seq
302 aa
AA seq
DB search
MPSGIPRTIGDVRDELELRFVKGHGTGNDFVLLPDPDGDLDLTADLVRALCDRRTGIGGD
GVLRVVLCAAVPEAAGLAGRARWFMDYRNADGSVAEMCGNGARVFARYLVDAGYAQPGRF
HVATRAGLRLVEAAVDGDVTVDMGPPRIIDGPGAPVTVADRDFTATAVSMGNPHAVCFAG
DLDVAGLRRLDLTRPPSFSPVDFPDGVNVEIVVDRPAGVAMRVFERGVGETASCGTGACA
VAVAWAARRGARPAGAPVEVEVDVPGGGLVVIWQPETVLLRGPAELVFDGVLRRAEAHDP
VG
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
gtgccgagcggcatcccccgtacgatcggcgacgtgcgggacgagctggaactgcgattc
gtcaagggccacgggacgggcaacgacttcgtcctgctgccggatcccgacggggacctc
gacctcaccgcggacctggtgcgcgcgctgtgcgaccgacggaccggcatcgggggcgac
ggggtgctgcgggtggtgctctgcgccgcggttcccgaggcggccggtctggccggccgg
gcgcgctggttcatggactaccgcaatgctgacggttcggttgccgagatgtgcggtaac
ggcgcccgggtgttcgcccgctacctcgtcgacgccggatacgcccagcccggacggttc
cacgtcgcgacccgcgccgggttgcggctcgtcgaggccgcggtggacggtgacgtcacg
gtcgacatgggaccgccgcggatcatcgacggacccggggccccggtcaccgtcgccgat
cgtgacttcaccgcgaccgcggtctcgatgggtaatccgcacgcggtctgcttcgccggc
gacctggacgtcgccgggctgcgtcggctcgacctgacccgaccaccgtccttctccccg
gttgacttcccggacggggtgaatgtggagatcgtcgtcgaccggccggctggggtggcg
atgcgggtgttcgaacgtggggtcggggagaccgcgtcctgcggcaccggtgcctgcgcg
gtcgcggtggcctgggcggcccggcgaggtgcccggccggcgggtgcgccggtcgaggtc
gaggtggatgtgcccggcggcggcctggtcgtgatctggcagccggagaccgtgctgttg
cgagggcccgccgagctggtcttcgacggcgtgctgcgccgtgcggaggcccacgacccg
gtcgggtga
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