Pseudofrankia inefficax: FraEuI1c_1960
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Entry
FraEuI1c_1960 CDS
T01354
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
fri
Pseudofrankia inefficax
Pathway
fri00550
Peptidoglycan biosynthesis
fri01100
Metabolic pathways
fri01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
fri00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
FraEuI1c_1960
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FraEuI1c_1960
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fri01011
]
FraEuI1c_1960
Enzymes [BR:
fri01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
FraEuI1c_1960
Peptidoglycan biosynthesis and degradation proteins [BR:
fri01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
FraEuI1c_1960
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
ADP80010
UniProt:
E3ITW3
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All DBs
Position
2393614..2395923
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AA seq
769 aa
AA seq
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MNDGVRLRLVILRVLAVSLLVTLGARLWVLQVLDGAHYRRVAEDNRVREVVTPAPRGMIL
DDQGAALVRNRTSLVISVNRSTTDRQRDGGKAVFEQLSSVIGMSVADIEKKIRFCGPKVP
QPCWTGSPYQPVPIAKDATPQQALAIIEHPDRFPGITADLEAVREYPFGPLAAHELGYLA
PVSQSQLDQQTAQLKKDGKPSSDGTYHLNSLVGVAGLESVYDTALRGVDGVQDLEVDRFG
RVSGTASNTAPIAGDNVVLNLDQGVQAAAEQALRATLDKLPGDAKARTASAVVLNVKTGG
VIALASLPSYDPSVFVGGISQQDYQSLSDPANGIPLLSRAYQGTGPAGSTFKIVSTATAM
GLLGAKPDQKFPCSPTLQIGSQTFHNFEGESAGPITLHQALVISCDVIFDGFAYDEWLRD
GGLRNGKGPYPPAAENFVKMAREMGFGSKSGIDLPGESAGAVVDRAQAQQIWSELKDSYC
RRAKNGYPEEKDPATAKRYQQYAAEACVDGYLYNAGAAAQFAIGQGQYLSVSPLQLAVAY
ASVANGGTVYEPQLAKAIVAPDGTVVKRFAPVVKSKVDVPPDVLGYIREALHGVTTEPGG
TGTGVFADWPSNIIPIGGKTGTAEVEGHQDTSWFASFAPVNDPQYAVVVSVPDSGQGAMY
AAPVVKSIYQAIFGVGRPAALPGGLPPASLPSVVHDAGAIAAPQANGPAGAVPPVAAGAL
PDAAAPGAAGGAVLPAALRAGPAATGGQPAQVGVTSAGGPRAPPSSGAG
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacggggtccgcctgcgcctggtgatcctgcgcgtcctcgccgtctccctgctg
gtgacgctgggcgcccggctgtgggtgctgcaggtgctcgacggggcgcactaccggcgg
gtcgccgaggacaaccgggtgcgcgaggtggtgacgcccgcgccgcgcgggatgatcctc
gacgaccagggcgcggccctggtccgcaaccgcacctcgctggtcatctcggtgaaccgc
tcgaccaccgaccgccagcgtgacggtggcaaggcggtgttcgagcagctgtcctcggtc
atcggcatgtccgtcgccgacatcgagaagaagatccggttctgcgggccgaaggtgccg
cagccgtgctggaccggctcgccgtaccagccggtcccgatcgcgaaggacgccactccg
caacaggcgctcgcgatcatcgagcatccggaccgcttccccggcatcaccgccgacctg
gaggccgtccgcgagtacccgttcggcccgctcgccgcgcacgagctcggctacctggcc
ccggtcagccagagccagctcgaccagcagaccgcgcagctgaagaaggacggcaagccc
agctccgacgggacctaccacctcaacagcctggtcggggtcgccggcctggagtcggtc
tacgacacggccctgcgcggcgtcgacggcgtccaggacctggaggtcgaccggttcggc
cgggtctcgggcaccgcgtcgaacacggcgccgatagcgggcgacaacgtggtcctcaac
ctcgaccagggagtccaggcggctgcggagcaggctctgcgggccacgctggacaagctg
ccgggtgacgcgaaggcccggacggcctcggcggtggtgctcaacgtgaagaccggcggc
gtgatcgccctggccagcctgccgtcctacgacccgtcggtgttcgtcgggggcatctcc
cagcaggactaccagtcgctgtccgacccggcgaacggcatcccgctgctgtcccgggcc
taccagggcaccggcccggccggctcgacgttcaagatcgtctcgaccgccaccgcgatg
ggcctgctgggcgccaagccggaccagaagttcccgtgctcgccgacgctgcagatcggc
agccagaccttccacaacttcgagggcgagtcggccgggccgatcacgctgcaccaggcg
ctggtcatctcctgtgacgtgatcttcgacgggttcgcctacgacgagtggctgcgcgac
ggcggcctgcgcaacggcaagggcccctacccgccggccgccgagaacttcgtcaagatg
gccagggagatgggcttcgggtcgaagtccggcatcgacctgcccggggagagcgccggc
gccgtcgtcgaccgggcgcaggctcagcagatctggagcgagctgaaggactcctactgc
cgccgggccaagaacggctacccggaggagaaggatccggcgacggccaagcgctaccag
cagtacgccgccgaggcctgcgtcgacggctacctgtacaacgccggcgcggcggcccag
ttcgccatcgggcagggccagtacctctcggtgagcccgttgcagctggccgtcgcctac
gcctccgtggccaacggcgggacggtctacgagccgcagctggccaaggcgatcgtcgcg
ccggacggcacggtcgtgaagcggttcgccccggtcgtcaagagcaaggtcgacgtgccg
ccggatgtgctcggctacatccgcgaggccttgcacggcgtcacgaccgaacccggcggc
accggcaccggcgtgttcgccgactggcccagcaacatcatcccgatcggtggcaagact
ggcaccgccgaggtggagggacaccaggacacctcctggttcgcctcgttcgccccggtg
aacgacccgcagtacgccgtcgtggtctccgttcccgactccggccagggcgcgatgtac
gccgccccggtggtgaagtcgatctaccaggcgatcttcggcgtgggccggccggcggcg
ctgccgggtgggctgccgcccgccagcctgccgtcggtggtccatgacgccggggcgatc
gcggccccgcaggcgaacggtccggccggtgccgtcccgccggtggcggcgggcgccctg
ccggacgccgcggcgccaggcgccgccgggggagcggtgctgccggcggccctgcgcgcg
gggcccgcggccaccggcgggcagccggcccaggtgggcgtcacgtcggccggcggcccg
cgcgcgccgccgtccagcggcgccgggtag
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