Fibrobacter succinogenes: FSU_2945
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Entry
FSU_2945 CDS
T02105
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
fsc
Fibrobacter succinogenes
Pathway
fsc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fsc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FSU_2945 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fsc03019
]
FSU_2945 (pnp)
03016 Transfer RNA biogenesis [BR:
fsc03016
]
FSU_2945 (pnp)
Enzymes [BR:
fsc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
FSU_2945 (pnp)
Messenger RNA biogenesis [BR:
fsc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FSU_2945 (pnp)
Transfer RNA biogenesis [BR:
fsc03016
]
Prokaryotic type
tRNA degradation factors
FSU_2945 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
Citrate_ly_lig
Motif
Other DBs
NCBI-ProteinID:
ADL26684
UniProt:
C9RL26
LinkDB
All DBs
Position
3401452..3403686
Genome browser
AA seq
744 aa
AA seq
DB search
MSTEAYQAKYGKMLDPKEVSVNLPDGRVITFETGRIAKQARGSAVAKMGDAFVLSTVCYG
EEKDGDFFPLTVEYREKSYAAGRLPGGYSKREPGRPSDEEILSARIIDRPIRPMFPENFT
REVQVIVQVLSSDKKFAPDVLGVSAASLSIGLSELPFEQQVAAVRVAVVDGQNIVMPTYD
QVAVADLDLVVAGTEDSVCMVEGGAYEVSEDTMIGAILAGHEVIKQMCKAQQELVDRCAK
PKMELKPKFVGEEHDKLVATVKDVVWDELNKDVHSNMVKTDFYPAMADLCARMLEDPRIL
AIIGEGEAQNAQLAADAKGIFSDLERTAMREMILNEGVRLDGRTTTEVRPIEIEMGVLPR
AHGSAIFQRGETQGLVICTLGTKADEQRFESLQGEGAKSYMLHYNFPPFSVGECKKLGLS
RREIGHGHLAERSLAAVLPLPEDFPYTIRVVSEIMESNGSSSMASVCGGCLSLMDAGVPI
KAPVAGIAMGLISEKGSVKEGGKIKILSDITGTEDHLGDMDFKVTGTAEGITAFQMDIKI
RGITPELMREALEQARQGRIHILGRMAELGLPAPRPHVSEKAPTMLKMRIPTTKIRDVIG
SGGSVIKGMQAQTGCTINIDDNGNIDIAAPTGKAGEVCRRMIEELTAEPEPGRKYKGKVK
TIQPFGAFVEILPGRDGLVHISELADRRVDKVEDVVHVGDEVEVLCLGVDPKGKVKLSMK
ALLPPKAAPAAEAAPEAPAAPTEA
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacagaagcttatcaagctaaatacggcaagatgctcgacccgaaggaagtgtct
gtaaaccttccggatggccgtgtcattacgtttgaaactggccgtatcgcaaagcaggca
cgtggttctgctgtcgccaagatgggggacgcgtttgtcctttctaccgtttgctacggt
gaagaaaaggatggtgacttcttccctctgacagttgaataccgcgaaaagtcttatgct
gccggacgcctgcctggtggctatagcaagcgcgaaccgggtcgtccgagcgatgaagaa
attctttctgctcgtattatcgaccgtccgattcgtccgatgttcccggaaaacttcact
cgtgaagtccaggtcatcgttcaggttctttcttccgacaagaagttcgctccggacgtt
cttggcgtaagtgctgcatctctctctatcggtctttctgaactcccgttcgaacagcag
gtcgctgccgttcgcgtggctgtcgtcgatggccagaacatagtgatgccgacttatgac
caggttgccgtggccgatctagacctcgtggtcgccggtacggaagactctgtgtgcatg
gtcgaaggtggtgcttacgaagtgtccgaagacacgatgattggcgctatcctcgctggt
cacgaagtcatcaagcagatgtgcaaagcccaacaggaactggtggaccgctgtgctaag
ccgaagatggaactcaagccgaagtttgttggtgaagaacacgacaagctcgttgctacg
gtcaaggatgttgtctgggacgaactgaacaaggacgtccactccaacatggtgaagacg
gacttctatccggctatggcagacctctgcgctcgtatgctcgaagatccgcgtatcctc
gctatcatcggcgaaggcgaagcacagaatgctcagctcgctgcagatgcaaagggcatc
ttcagtgacctcgaacgcacggctatgcgcgaaatgattttgaacgaaggcgttcgtctt
gacggccgtaccacgaccgaagtccgcccgatcgaaatcgaaatgggcgtgctcccgcgt
gctcacggttctgcaatcttccagcgtggcgaaacccagggtctcgtcatttgtacgctt
ggaacaaaggctgacgaacaacgtttcgaaagcttgcagggcgaaggcgcaaagagctac
atgctccattacaacttcccgccgttctccgtcggtgaatgcaagaagctcggtctctct
cgccgtgaaattggtcacggtcacttggccgaacgctccctcgcagcagttcttccgctc
ccggaagatttcccgtacacgatccgcgtggtttccgaaatcatggaatccaacggttct
tcttccatggcctctgtttgcggtggctgcctcagcttgatggacgctggcgttcctatc
aaggctccggttgcaggtatcgccatgggcctcatctccgaaaagggctccgtcaaggaa
ggcggcaagatcaagatcttgtccgacattaccggtacggaagaccacctcggcgatatg
gacttcaaggtaacgggtactgccgaaggtatcactgcattccagatggacatcaagatc
cgcggtatcaccccggaacttatgcgtgaagctttggaacaggctcgtcagggccgtatc
cacattctcggtcgcatggctgaacttggcctcccggcaccgcgtccgcacgtttctgaa
aaggctccgacgatgctcaagatgcgcatcccgaccacgaagattcgtgacgttatcggt
tctggtggctctgtcatcaagggtatgcaggctcagacgggctgcaccatcaacattgac
gacaacggcaatatcgacatcgccgccccgacgggtaaggctggtgaagtttgccgccgc
atgatcgaagaactcacagcagaaccggaaccgggccgcaagtacaagggcaaggtgaag
acgatccagccgtttggcgcattcgttgaaatcctcccgggtcgcgatggtcttgtccac
atctccgaacttgccgaccgccgtgtcgataaggtcgaagacgttgttcatgtcggtgac
gaagtcgaagtgctctgcctcggtgttgacccgaagggcaaggtgaagctctctatgaag
gctttgctccctccgaaggctgccccggctgctgaagctgctcctgaagcaccggctgct
ccgactgaagcttag
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