Flavobacterium sediminilitoris: LXD69_13230
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Entry
LXD69_13230 CDS
T08185
Name
(GenBank) RluA family pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
fsd
Flavobacterium sediminilitoris
Brite
KEGG Orthology (KO) [BR:
fsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fsd03009
]
LXD69_13230
Enzymes [BR:
fsd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
LXD69_13230
Ribosome biogenesis [BR:
fsd03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LXD69_13230
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
GNVR
Motif
Other DBs
NCBI-ProteinID:
UOX32996
LinkDB
All DBs
Position
2903749..2904783
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AA seq
344 aa
AA seq
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MSDKNVEEIDDDLHEHYRFEVSKGQQALRIDKFLMNLIENSTRSKIQKAADSGNIFVNDN
VVKSNYKVKPDDVVTVMLEHPPYEHLLVGENIPLDIIYEDDQLIVVNKPAGMVVHPGHGN
YSGTLVNALAYHFDNLPMNSSERPGLVHRIDKDTSGLLVVAKTELAMDYLSKQFAAKTSE
REYVGIVWGDIKEEEGTIEGNIDRHPTNRMQMTVYPDGEQGKPAVTHYKVLERLGYVTVV
SCKLETGRTHQIRVHMKYIGHTLFNDERYGGNLILKGTTFTKYKQFVDNCFKVLPRQALH
AKTLGFEHPVTKEFMRFDTEVPTDMQECIEKWRVYSKAQTFTEE
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgagtgataaaaatgtagaggaaattgatgacgatttgcatgagcattatcgttttgag
gtgtcaaaaggacaacaagctttgcgtattgataaatttttaatgaatttaattgaaaat
tcaacacgaagtaaaattcagaaagcagccgattcgggaaatatttttgtaaatgataat
gttgtaaaatcaaattataaggtaaagccagatgatgtagtgactgtaatgttagaacat
ccaccttatgaacatttattagtaggtgaaaatatacctttagatattatttatgaagac
gaccaactcattgtagtaaataaaccagcaggaatggtagttcatccaggtcatggtaat
tattctggaactttagtaaatgcattagcttatcattttgataatttaccaatgaatagt
tctgagcgtcctggtttagttcatagaattgacaaagatacttcagggttgttagtagtt
gctaaaactgagcttgcaatggattatttatcgaaacagtttgctgctaaaacatcagaa
agagaatatgtaggaattgtttggggagatattaaggaagaagaagggactatagaagga
aatattgatagacatccaacaaatagaatgcaaatgacggtttatcctgatggagaacaa
ggaaaaccagcagttacgcattataaagttttagaacgtttagggtatgttacggttgtt
tcttgtaagttagaaacaggtagaacacatcaaataagagtgcatatgaaatatattggc
catactttgtttaatgatgagcgttatggcggtaatttaattttaaaaggaacaactttt
acaaaatataagcagtttgtggataattgttttaaagtgttacctaggcaggcattacat
gctaagacattagggtttgagcatcctgtaactaaagagtttatgcgttttgataccgaa
gttcctactgatatgcaagaatgtatagaaaaatggagagtgtattctaaagcacaaact
tttactgaggaataa
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