Fibrobacter succinogenes: Fisuc_2175
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Entry
Fisuc_2175 CDS
T01099
Name
(GenBank) RNA-binding S4 domain protein
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
fsu
Fibrobacter succinogenes
Brite
KEGG Orthology (KO) [BR:
fsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fsu03009
]
Fisuc_2175
Enzymes [BR:
fsu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
Fisuc_2175
Ribosome biogenesis [BR:
fsu03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Fisuc_2175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF5818
Motif
Other DBs
NCBI-ProteinID:
ACX75761
LinkDB
All DBs
Position
complement(2686878..2687609)
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AA seq
243 aa
AA seq
DB search
MRINKYISLSGFASRRAADELVADGRVQVNGETISDLGHQVDETKDQVTVDGKLLKLPTN
KKTKVIMFHKPAGCVCTKDDPQGRRTVYDYLPPGYHNFKYVGRLDLQSRGLLLFTDDGEL
LYRLTHPSFEVPRSYYVWTTRPLSESAAQRLVDGVDIRDPEDPDAQEEIAFATDVYLENG
FAELVLIEGKNREIRRMMRAIGYEIRDLKRVSYCQIQLGDLPAGEFRELTPNELNKLRQA
VHL
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgcgtataaacaagtacatttctctcagtggttttgctagccgccgcgccgcagacgaa
ctcgtcgccgacggtcgcgtacaggtaaacggagaaacgatttccgacctcggccatcaa
gtggacgaaaccaaggaccaggtgacggttgacggaaagttgctgaagctcccgacaaac
aagaaaacaaaagtcatcatgtttcacaagccggccggttgcgtctgcaccaaggacgac
ccgcagggccgccgcacggtttacgattacttgccgccgggataccataatttcaagtac
gtcggacgactcgacttgcagagccgtggtcttttgcttttcaccgatgacggcgaattg
ctttaccgcctcacgcacccgagttttgaagtgccgcgcagctactacgtgtggaccact
cgtccgctcagcgaatctgccgcccagcgcttggtcgatggcgtggacatccgcgacccg
gaagatccggatgcccaggaagaaattgcattcgccacagacgtctatctcgaaaacgga
tttgcagaacttgtgcttatcgaaggcaagaaccgtgaaatccgccgcatgatgcgtgcc
atcggttacgaaatccgcgacctcaagcgcgtaagctactgccagattcagctcggcgac
ttgcccgcaggcgaattccgcgaactcacgccaaacgaactgaacaaattgcgacaggcc
gtgcatttgtag
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