KEGG   Fusobacterium varium: FV113G1_08280
Entry
FV113G1_08280     CDS       T05280                                 
Name
(GenBank) exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
fva  Fusobacterium varium
Pathway
fva03410  Base excision repair
fva03430  Mismatch repair
fva03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:fva00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    FV113G1_08280
   03430 Mismatch repair
    FV113G1_08280
   03440 Homologous recombination
    FV113G1_08280
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fva03400]
    FV113G1_08280
DNA repair and recombination proteins [BR:fva03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     FV113G1_08280
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     FV113G1_08280
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      FV113G1_08280
SSDB
Motif
Pfam: DHH RecJ_OB DHHA1
Other DBs
NCBI-ProteinID: BBA50481
LinkDB
Position
complement(939352..941934)
AA seq 860 aa
MRNTRWVYRENPLKNNEDIQNLNLDKDILNLLYNRNIIEKEEIRNFLNVNIKNMADPFSL
KDVDKAVNRLLQAKENNETVWVYGDYDVDGITSVSLCFLALSELGMNVRYYIPLRDEGYG
LNIEAINYIKNEGGTLIITVDCGISSHEEIAHASALGIDMIVTDHHEINNGNPEALAVIN
PKREDNEYTFKYLAGVGTAFMMMSALFKTLDKEEDVYKYLDIVAIGTVADIVPLLKENRI
FVKEGLEYLKRSRWLGLNMLIKKIFEDYDIRKFNTYDIGFIIAPIFNAVGRLEDAKKAVE
LFIEKDHRICSAAIKDLLEKNSERKEIQEEIFEKAIEKIENEKLYEKSILIVGEKGFHHG
VIGIVASKVLDRYYKPTIIMEIKPDEGIATASCRSIEGFNIIEAINNFSDLLIKYGGHSG
AAGFSIKIENIEEFSIKLNDYAKAAMEDSTLIKPIKVDRPLPFYKISYDFLDKISLLEPF
GFGNPSPLFSLNNCQFDGLRLIGKDKKHIMMNIIKNGNEIRNCVWFNSDDVFENLVNLRN
IDIAFKLKLETYKDRYQYKMYVEDIRETIQTSNEIENIFDLYDIQFPIETVIYTRRKMDS
PKIRLTFSEQGITVANDRTYLGNLDTQTEYILNSLKKMYNIEFSAAVKDVILKDENYNVH
ILIDKDYSFSSYAIKQSELFKEIKNFLVGEFNYNYIQKKTLASVFKDKNNTVTIMERGRG
IETIIQTIGLYYKNINEKALLVTKENISKKTISSIGIGDKFISGYDFYIFLNPEKSEIEK
YIDRKILVITEDKTFNIQGFTHITDNYEIPSNIKFLSEEELKNKNIIFSKKLPLDKKNQV
IKNLKTYMEIYSTKDILPYL
NT seq 2583 nt   +upstreamnt  +downstreamnt
atgagaaatacaagatgggtttatagagaaaatcctctgaaaaataatgaagatattcag
aatcttaatttagataaagatattcttaatcttctatataatagaaatataatagaaaaa
gaagaaataagaaattttctgaatgtaaatataaagaatatggcagatcccttttcttta
aaagatgttgacaaagctgtcaacagacttcttcaagcaaaagaaaacaatgaaacagtg
tgggtatacggagattatgatgttgatggaattacatcagtttctttatgttttttagct
ctaagcgagctgggaatgaatgtaagatactatattcctttaagagatgaaggctatgga
ctgaacatagaagcaataaattatataaaaaatgaaggaggaactctgatcataactgtt
gactgtggtatctcctcacatgaggaaatagctcatgcttcagctttaggtatagatatg
atagttactgaccatcatgaaataaataacggtaatcctgaagctctggcagttatcaat
cctaaaagggaagataatgaatatacatttaaatatttagctggagtaggaactgctttt
atgatgatgtccgccctttttaagactcttgataaagaagaagatgtttacaaatatctt
gatatagttgcaataggtactgtagcagatattgttccccttcttaaagaaaatagaata
tttgtgaaggaaggattggagtatctcaaaagaagcagatggcttggactcaatatgctt
attaaaaaaatttttgaagattatgatataagaaaatttaatacctatgatataggtttt
ataatagctcctatatttaatgctgttggaagattggaagatgctaaaaaagctgttgaa
ctttttattgaaaaagaccacagaatttgttcagcagcaataaaagatcttttagaaaaa
aacagtgagagaaaagaaatacaggaagaaatatttgaaaaagctattgaaaaaatagaa
aatgaaaaactttatgaaaaaagtattctcatagtaggagaaaagggattccatcatgga
gttattggtatagttgcatctaaagttctggatagatactacaaacctactataattatg
gaaataaaacctgatgagggaattgccactgcttcatgcagaagtatagaaggattcaat
attattgaagctattaataatttttctgatcttctcatcaaatatggaggccacagtggt
gctgctggtttttcaataaaaatagaaaatattgaagaattcagtataaaactcaatgac
tatgccaaagctgcaatggaagacagcactctcataaaaccaattaaagttgacagacca
cttcctttttacaaaatatcatatgactttttagataaaatatctcttttagagccattt
ggtttcggcaatccttctcctttattctcattgaataactgtcaatttgatggattaaga
ctaataggaaaagataaaaaacacattatgatgaacatcataaaaaatggaaatgaaata
agaaattgtgtatggttcaatagtgatgatgtttttgaaaatcttgtcaatttaagaaat
atagatatagcctttaaattaaaattagaaacttataaagacagatatcaatataaaatg
tatgttgaagatataagagaaaccattcagacttcgaatgaaatagaaaatatttttgat
ctttatgatattcaatttcctatagaaacagtaatttatacaagaagaaagatggattca
ccaaaaataaggcttactttctctgaacagggaataactgtagctaatgatcgtacatat
cttggaaatttagatactcagactgaatatatactaaattctttaaaaaaaatgtataac
attgaattttctgctgctgtaaaagatgttatattaaaagatgaaaattataatgttcat
attcttattgataaagattattctttttcatcctatgccataaagcaaagcgagctgttt
aaagaaataaaaaactttcttgttggagaatttaattataattatatccaaaagaaaact
ttagcatctgtttttaaagataaaaataatacagtgacaattatggaaagaggaagagga
attgaaactataattcaaactataggactttattacaaaaatataaatgaaaaagctctt
cttgtaacaaaagaaaatatatctaaaaaaactatttcaagtataggaataggggataaa
tttattagtgggtatgatttttatattttccttaatcctgaaaaatctgaaatagaaaaa
tatattgatagaaaaattctagtaataacagaagataaaacttttaatatacaaggattt
actcatattacagataattatgaaattccatcaaacataaagtttctatctgaagaagaa
ctaaaaaataaaaatataatttttagtaaaaaactccctttagacaaaaaaaatcaagtc
attaaaaatttaaaaacttatatggaaatatattcaaccaaagatatacttccgtattta
taa

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