Fragaria vesca (woodland strawberry): 101299877
Help
Entry
101299877 CDS
T02666
Name
(RefSeq) tryptophan synthase alpha chain-like
KO
K01695
tryptophan synthase alpha chain [EC:
4.2.1.20
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve00260
Glycine, serine and threonine metabolism
fve00400
Phenylalanine, tyrosine and tryptophan biosynthesis
fve01100
Metabolic pathways
fve01110
Biosynthesis of secondary metabolites
fve01230
Biosynthesis of amino acids
Module
fve_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
101299877
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
101299877
Enzymes [BR:
fve01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
101299877
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trp_syntA
PcrB
His_biosynth
ThiG
Ribul_P_3_epim
NanE
TMP-TENI
IGPS
GxGYxYP_N_3rd
Motif
Other DBs
NCBI-GeneID:
101299877
NCBI-ProteinID:
XP_004302602
LinkDB
All DBs
Position
LG6:7243606..7244803
Genome browser
AA seq
321 aa
AA seq
DB search
MAISRSLTAPGFLYTKKSHNPFQQQLHCPSVTSSNLSIKRAHSRPNPIAAHTLPRTISIS
QTFTKLKSQGKVAFIPYITAGDPDLSTTQAALKVLDSCGSDAIELGLPYSDALLDGPVIR
ASATRSLARGTNFNKVISMLKEVVPQLSCPIVLFSYYNPIIKQGIKSFMFTISQAGVRGL
LVPDIPFEETEILRNEAAKNNVELVLLTTPATTTDRMKDIVKASEGFVYLASTAGVTGAR
GRVNEQVKGLLKEIKEVMPSKAVAVGFGLSKPEHVKQVAEWGADGVVVGSAIVKVLGEAR
SPLGRLIELETFTKSLESALR
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggctatttctagatcccttactgctcccggctttctatacacaaagaaatcccacaac
ccgtttcaacaacagcttcattgtccatccgtaacatcatcaaacttatcaatcaaaaga
gctcatagtaggccaaatccaatcgctgctcacaccctccctcgtaccataagcatctca
caaactttcacaaaattgaagtcacaagggaaagtggcattcatcccctacatcaccgcc
ggtgatccagatctgtcgacaacccaggcggcgttgaaggtgctcgattcttgcggatca
gacgcaatcgaactaggccttccctactccgatgcgttactagacggtcctgtcatacgt
gcttcagcaacacgttccttggctagagggacaaacttcaacaaagttatatccatgttg
aaggaggttgttccacaactgtcttgccctattgttcttttttcatactataaccctatc
atcaagcaaggcatcaaaagctttatgttcactattagtcaagcgggtgtacgcgggctt
ctggtcccggatattcctttcgaagagaccgaaatcttgaggaacgaagctgcaaaaaat
aacgttgagttggtgctactgacaactccagccactacgacagacagaatgaaagacatc
gtgaaagcttcggaaggatttgtgtacctagcgagcacggcgggggtcaccggagctcgt
gggcgtgtgaatgaacaggttaagggtcttttgaaggagattaaggaggtcatgcccagc
aaggcagtggcggttgggttcgggctgtcgaagccggagcatgtgaagcaggtggctgag
tggggggctgatggcgttgttgttggtagtgccattgtgaaggttctgggtgaagctaga
tctccgcttggaaggttgatagaacttgaaactttcaccaagtctttggagtctgctctt
cgttga
DBGET
integrated database retrieval system
