Fragaria vesca (woodland strawberry): 101309507
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Entry
101309507 CDS
T02666
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit CG7185
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03015
mRNA surveillance pathway
fve03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101309507
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
101309507
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fve03019
]
101309507
Messenger RNA biogenesis [BR:
fve03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
101309507
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
101309507
NCBI-ProteinID:
XP_004310003
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Position
Un
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AA seq
646 aa
AA seq
DB search
MDPMGEEQIDYEEEEYGGAQKLQYQESGAIPALADEEPMVEDDEYDDLYNDVNVGEGFLQ
MHRPEPPLPPAGVGNGGLQAQKNNVPEQRVQGGASQEVKNPGFSVEGKYSSVPEQKDQPP
VSVVPEMASQKGRVMEMTHDAQVRNMGFQGAATMQSNVVADSSDLTGKIANGPIPSMNSG
SNGPPAVQQMPANQMNMKINVNRPMVNENQIRPPVENGSATLFVGELHWWTTDAELEGVL
SQFGRIKEIKFFDERASGKSKGYCQVDFYDPAAASACKEGMDGYVFNGRACVVAFASSQT
LKQMGDSYVNKSQGQVQTQPQGRRPMNDGAGRGGNMNFQGGDTGRNFGRGNNWGRGGQGV
LNRGPGGGGPGRGRGAMGARNMVGNNAGVGTGANGGGYGQGLGGPGFGGPVGGMMNAPGM
MGPGFDPTYMGRGGGYGGFPGPGFPGMLPQFPGVNAMGLAGVAPHVNPAFFGRGMATNGM
GMMGSSGMEGHHAPMWNDPSMAGWTGEEQDRRTRESSYGGDDGGSEYGNYGEANHEKPVR
SSAAPRERERESEREWTGTSERRHRDEREQDWDRSEREHREPRYKEEKDSYRDHRRRERD
VAYEDDRDRGHSSSRPRSRSKAMPEDDHRSRSRDVDYGKRRRLPSE
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggatccaatgggcgaggagcaaatagattatgaggaggaggaatatggaggtgctcag
aagctccaatatcaggaaagtggagccatacctgcgcttgcagatgaagaaccgatggta
gaagatgacgagtacgacgatctctacaatgatgttaatgttggagaaggcttcctgcag
atgcaccgacctgagccgccactcccacctgctggtgttgggaatggaggactccaagct
cagaaaaataatgttcctgaacaaagagttcaaggtggtgcttctcaggaagtgaaaaat
ccgggtttttcagttgaaggaaagtattctagtgttcctgaacagaaggatcagccccca
gtgtctgtggtgccagaaatggcatctcaaaaggggagggttatggagatgactcatgat
gctcaagtgaggaatatggggtttcaaggggcagcaactatgcagtctaatgttgtcgct
gattcttcagatcttactggaaaaattgcaaatggccctattccatcgatgaattctggt
agtaatggtcctccagctgttcaacagatgcctgctaatcaaatgaatatgaagataaat
gttaatcgtccaatggtaaatgaaaaccaaatccgtcccccagttgagaatggttcggcc
acactgtttgttggagaactccattggtggactactgatgctgagctggaaggtgttttg
tctcagtttgggaggatcaaggaaattaagttctttgatgagagagccagtggtaaatcc
aaaggttattgtcaggtagatttttatgacccagcagctgccagtgcatgcaaagaggga
atggatggttatgttttcaatgggagagcttgtgttgtggcctttgcttcttcacaaact
ctaaagcagatgggagattcttatgtcaacaaatcccaaggccaggttcagactcagccc
caaggaagaaggcctatgaatgatggtgctgggagagggggaaatatgaattttcaaggt
ggagacacagggagaaattttggaaggggtaataattggggacgaggtggacagggagta
ctcaacagaggtcctggtggtggaggacctgggaggggaagaggggctatgggtgcaagg
aacatggttggaaacaatgccggggttggaactggtgctaatgggggaggctatggacag
ggacttggaggtcctggatttggtggtcctgttggaggtatgatgaatgcaccgggtatg
atgggtcctgggtttgatccaacatatatgggccgcggaggtggttacggaggttttcct
ggtcctggttttcctggaatgcttcctcaatttcctggtgttaatgcaatgggacttgct
ggggttgctcctcatgtaaacccagctttctttggcaggggcatggcaacgaatgggatg
gggatgatgggttcatctggaatggaggggcatcatgcccctatgtggaatgatccaagc
atggctgggtggaccggagaagaacaggatcgaagaactagggaatcgagctatggtggt
gatgatggtgggtctgagtatggaaactatggggaggcaaatcatgagaaaccagttagg
tcaagtgctgcccctagggaaagagaaagggaatctgagcgtgagtggacaggaacctct
gagaggaggcatcgtgatgaaagggaacaagactgggacaggtctgagagggagcatagg
gagcctaggtacaaggaagaaaaagatagttaccgagaccatcggcggagagagcgtgac
gtggcctatgaggatgaccgggacagaggacactcttcttcaagacctcgcagcaggtcc
aaggcaatgccagaagatgatcatcgttctcgatcaagggatgtggattatgggaagagg
agaagattaccatccgagtga
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