Candidatus Formimonas warabiya: DCMF_05105
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Entry
DCMF_05105 CDS
T07208
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
fwa
Candidatus Formimonas warabiya
Pathway
fwa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fwa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
DCMF_05105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fwa03400
]
DCMF_05105
DNA repair and recombination proteins [BR:
fwa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
DCMF_05105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_14
AAA_27
Rad17
nSTAND3
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ATW28369
UniProt:
A0A3G1L161
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Position
1082761..1085364
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AA seq
867 aa
AA seq
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MMKQYEAIKINHKDALLFFRLGDFYEMFLDDAVTASRELEITLTARDGGNGKKIPMCGVP
YHAVDGYLAKLISRGYKVAICEQMEDPRSAKGIVKREVIRIVTPGTVLESNMLQESSQNY
LLAISHHDSHFGIAYTDISTGEFMTTEISGDTTEQKLFDEIARINPAECILPMSLYHDEL
FRAKLLKTVSLTITKVADDNFLFQDALKQVLSHFQVASADALGLKDLPSAICATGAILSF
LKETQKKDLSYLNHLRTYSISSFMMIDQSTRRNLELISTIREGQRKGSLLWVCDKTSTAL
GARLVKQWMEKPLLVKEHIVKRLNAVEELTNNVFAREDIRLLLKKIYDLERLMSRIAYGS
ANPRDLIALKNSVTALPEMGQLINTLQSDLFQDLAKSFDPLEDISILVEKSINDDPPLST
REGGIIKEGYDGEVDELRGITSHGKQWIAELEAKEKNRTGIKSLKVGFNKVFGYFIEVTH
ANLSSVPDHYVRKQTLANAERYITQELKEWENKILGAGEKLASREYELFHAVRETIALSA
GRIQQTARVIAQIDVLLSFAIVALENNYVKPEINENDIIHIMDGRHPVVEKIAGTNYVPN
DTYLDNQEHQVCLLTGPNMAGKSTYMRQVALCVLMAQIGCFVPAAQAKIGLVDRIFTRVG
AADDLAGGQSTFMVEMCETSNILRHATKSSLIILDEIGRGTSTYDGLSIAWAVVEYILKP
QVGAKTLFATHYHELTELAEKYPQVKNYSVAVKEKEGGIIFLRKIVPGGTDKSYGIQVAK
LAGLPEELLNRAKEILLELEQTDMTGDLKGKMTPDKHKPLQMSFFVPDPPKHPLVAELES
LDLNNLTPLDALLKLNQWQRKLKNYSG
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaacaatacgaggcaatcaagatcaatcacaaagatgcccttttgtttttccgg
ttaggcgacttttatgaaatgtttttggacgatgcggtaacggcatcccgtgaactggaa
attacattaacggcaagagacgggggaaatgggaaaaaaattcctatgtgcggtgttcct
tatcatgcggttgacgggtacctggccaaactgatctctcgcggctataaagtcgctata
tgcgagcaaatggaagatcccaggtctgccaaaggcattgtgaaacgtgaagtgatccgg
attgttacgccgggcacagttttagaaagcaacatgctccaggagtccagtcaaaattat
ttgttagccatctcccatcatgacagccatttcggtatcgcctataccgacatttctaca
ggcgaattcatgaccacggaaatttccggagataccacggaacagaaactttttgatgaa
atcgcccgtattaacccggcagaatgcattttgcccatgtctctttatcatgacgagctg
ttccgggcgaaacttttaaagactgtttccctgaccatcacgaaagtagccgacgataat
tttctttttcaggatgctttgaaacaagtattatctcacttccaggtcgcttctgccgat
gcactagggctaaaagatcttccttccgctatttgtgccacgggggcgatcttaagtttt
ttaaaggaaacccaaaaaaaagatttatcttacctcaatcacttgcgtacttattctatt
tcctcgttcatgatgattgaccaaagcaccagaaggaacctggaattaatctccacgatt
cgggaaggccagcgcaaagggtccttgctttgggtttgcgataaaacctctaccgctctt
ggcgcccgcttggttaagcagtggatggaaaaacccctcttggtcaaagaacatatcgtg
aagcggctcaatgcagtggaagaactaacaaacaatgtttttgcccgggaagatatccgc
ctgctcctaaaaaaaatctatgacctggaacgcctaatgagtagaattgcttacggcagt
gccaatccccgggatttaattgccctaaaaaattcggttacagccctgcctgaaatggga
cagcttatcaacacactgcaaagtgacctttttcaggatctggccaaaagcttcgaccct
ctggaggatatctctattttagttgaaaagtctatcaacgacgatccccccctgtctacc
cgtgaaggaggcatcatcaaagagggttatgacggggaggttgatgagttacgcgggatt
acttcccatggcaaacaatggatcgcagaattggaagcaaaagaaaaaaaccggacggga
ataaagtctctcaaagtaggcttcaataaagttttcggctattttatcgaggtgacccat
gccaatctctcttctgttcctgatcactatgtacggaaacaaactttagctaatgcggaa
cggtacattacccaggaattaaaagaatgggagaataaaatcttgggagccggtgaaaag
ctggcttcccgggaatatgaattatttcatgcggtcagggaaaccattgccctgtctgcg
gggaggattcaacagaccgcccgcgtaatcgcgcaaatagatgtattgttgtcctttgcc
atcgtggctttggaaaataattatgtgaaaccggaaatcaatgaaaatgatattattcat
attatggacggacgccacccggtggtggaaaagatcgccggcaccaattatgttcccaat
gacacatacctggacaatcaggaacaccaggtttgccttttgactggaccaaacatggcc
ggaaagtcaacctatatgagacaggtggccttatgtgtcctgatggcccaaattggctgt
ttcgtaccggctgctcaagccaaaatcggcctggtcgacagaatttttacccgggtggga
gcggcagatgatctagccggcgggcaaagcacctttatggtagaaatgtgtgagacctcc
aatatcctgcgccatgccaccaaatccagcctgattattttagatgaaatcggtcgggga
accagtacttacgatggcttaagcattgcttgggctgtcgtggaatatattttgaaaccc
caagtaggggccaaaaccctttttgccacccattaccacgagcttacagagctggcggaa
aagtaccctcaggtaaaaaactattccgtcgcggtaaaagaaaaagaagggggcattatc
tttttaagaaaaatagtccccgggggaaccgataagagctatggaattcaagtggcaaaa
ttagccggattgcccgaagaattgctgaacagagcgaaagaaattttactggaattagag
caaacagacatgactggagacctcaaagggaaaatgactccggacaagcataaacctctt
caaatgagcttttttgtgccggatccccccaagcatcctctcgtcgccgagctagagtcc
ttggacttaaataatctcacgcccttggatgccttgttaaagttaaatcaatggcagcgc
aagctgaaaaattatagcgggtga
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