Flammeovirga yaeyamensis: KMW28_05785
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Entry
KMW28_05785 CDS
T07356
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
K01924
UDP-N-acetylmuramate--alanine ligase [EC:
6.3.2.8
]
Organism
fya
Flammeovirga yaeyamensis
Pathway
fya00470
D-Amino acid metabolism
fya00550
Peptidoglycan biosynthesis
fya01100
Metabolic pathways
fya01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
fya00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KMW28_05785
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KMW28_05785
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
KMW28_05785
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fya01011
]
KMW28_05785
Enzymes [BR:
fya01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
KMW28_05785
6.3.2.8 UDP-N-acetylmuramate---L-alanine ligase
KMW28_05785
Peptidoglycan biosynthesis and degradation proteins [BR:
fya01011
]
Precursor biosynthesis
Amino acid ligase
KMW28_05785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_4
ATP-grasp
RimK
ATPgrasp_ST
Reov_VP3_GTase
Motif
Other DBs
NCBI-ProteinID:
QWG03951
LinkDB
All DBs
Position
1:1495175..1497883
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AA seq
902 aa
AA seq
DB search
MKIGIFFGGISREREISFAGGRTVYDNLDKQLFEPVPIFVDSLGNFIHLDWSFVYKGTVR
DFYPPVPSVPTNLSGFQMYVESLGNLSEEQLNEMASLVGQRVKPDDFGQLFDFAFLALHG
PYGEDGNLQGLLEWYGIPYSGAGVLSSAIGIDKITQKKLFSDLGLVTPDYRVIDANDLTE
DQVATTFTSLKEALGMPLVVKAPRQGSSLGVSIVKEDSVEAFQAAAKKSLFIDEIKHEQW
TSLSDEDKMRFVHDFVDVRLGIGLPVYVNGDSEKILYNPKELYDHLTSELEEKGNDMVSY
QSLDAEERLLIEQHVKGREFSCIVVEDEDTQPLALPPTEIVRGNEGVFDYRSKYLPGMSR
KVTPIDLPIEKVREIQSKCEELYTKLQFDVYARIDGFVTESGEVFLNDPNTTSGMMPSSF
FFHQAAEIGLNPSQFLTFIIRTSLACRIRSGKNTVVTKPLLKELDQQIAQLSSDDQQKRR
VGVIMGGYSSERHISVESGRNIYEKLASSHKYEAIPIFLTGSNEHHEIYELPINIMLKDN
ADDIKLKIEQALSGEKHEVLTEAIQKASKITDKYAAGACFDPKPLNYDTLKDRVDAVFIA
LHGRPGEDGAVQKHLNEKGIPYNGSDVDSSEITIDKFATTEILGEKEVFVAEHMLLQKAV
WQNDAKAAIDEVESKFNYPLIAKPADDGCSSAVVMVKNRNTLEFFAEAMFRNEEEVAEDL
RNKLHLDKNEEFPSKQKILIEELISAKDADHFLEITGGMLTKWHEDGTRTYEVFEPSEAL
ASGEILSLEEKFLAGEGQNITPPRFSPDADEQKWISDAVRKDLENVAKILNVQGYCRIDA
FVRIWKEEKRVETIIIEVNSLPGMTPATCIFHQAAINGYKPYDFIDNILEYGRQRTEAKL
SR
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataggaatttttttcggaggtatttcacgagaacgtgaaatctcatttgcagga
ggtagaacagtttatgataacttagacaaacaattgttcgagcctgttccaatatttgtt
gatagtttaggtaacttcattcatttagattggagttttgtatataaaggtactgtacgt
gatttttacccaccagtaccaagtgttcctactaatttatcgggtttccaaatgtatgtg
gaatctctaggtaatttatcggaagaacaattaaatgaaatggctagtttggttgggcaa
cgtgttaagcccgacgatttcggtcagttatttgattttgctttcttggcattacacggc
ccgtacggagaggatggtaaccttcaaggtttattggagtggtacggtattccttattca
ggtgcaggtgtgttgtcttctgcaattggtattgacaagattactcagaagaaattattc
tctgatcttggtttggttacaccagattatagagtaatcgatgccaacgatttaaccgaa
gatcaagtagcaacaacttttacttcattaaaggaagctttaggaatgccattggtagtg
aaagcaccaagacaaggttcttctttaggggtgagtattgtgaaagaggatagcgttgaa
gctttccaagcggcagctaaaaagtcattatttatagatgagataaaacatgaacaatgg
acttctttatctgatgaagataaaatgcgttttgttcatgattttgtcgatgtgcgattg
ggtatcggtcttcctgtttacgtaaacggagatagcgaaaagatactttacaatccaaaa
gaactatatgatcacctcacttctgaattggaagaaaaagggaatgatatggtgagttat
caatcattggacgctgaagaacgtctattgattgagcaacatgtgaagggaagagaattc
tcttgtattgttgtggaagatgaagatactcaacctttggcattgcctcctacagaaatt
gttcgtggtaacgagggagtatttgattaccgatctaaataccttcctggtatgagtaga
aaagtgacaccaattgatcttcctatagaaaaggtgagagaaatccaatcgaaatgtgaa
gagttgtacaccaaactacaatttgatgtatatgctagaattgatggattcgttactgaa
agcggtgaggtatttttaaatgatccgaatacgacttcaggtatgatgccttcatcattc
ttcttccatcaggcagctgaaattggactaaatccatctcaattccttacgttcatcatc
agaacatctttggcttgtagaattcgctcgggtaagaatactgtggtgactaaaccgcta
ttaaaagagttggatcagcagattgctcagttgtcatcagacgatcaacaaaaaagaaga
gtgggtgtgattatgggaggttactcttcggaacgtcacatttctgtagaaagtggtaga
aacatctatgagaagttggcttcatcacataaatatgaggcgattcctattttcttgaca
ggaagtaatgagcatcacgagatctatgaactaccgatcaacatcatgttgaaagataat
gcggatgatatcaaattaaagattgaacaagcattatcgggagagaagcatgaagtattg
acggaagcgattcaaaaagcatcaaaaattacagataaatatgctgcaggagcctgtttt
gatcctaagcctttaaattatgatactttaaaggatagagtagatgcagtatttattgct
ttacatggtcgtccaggtgaagatggagctgtacagaaacatctgaacgaaaaaggtatt
ccttacaatggttctgatgtagatagctctgaaattacaattgataaatttgccactaca
gaaattcttggtgaaaaagaagtgtttgtggctgaacatatgttgttgcaaaaagcagtt
tggcaaaatgatgctaaagcagcgatcgatgaagtggaatctaaatttaattatccactt
atcgctaagcctgccgatgatggctgttcttctgcagtggtgatggtgaagaatagaaat
acattagaattctttgctgaagctatgttcagaaatgaagaagaggtagctgaagattta
agaaataaattacatcttgataaaaatgaggaattcccaagtaagcagaaaatcttaatt
gaggagttgatcagtgcgaaagatgcggatcatttcttagagatcactggtggtatgtta
acaaagtggcatgaagatggcactcgtacatacgaagtgtttgaaccatccgaggcttta
gcaagtggtgaaattttatcgcttgaagaaaaattcttagcaggagaagggcagaacatt
actcctccaagattttctcctgatgctgatgagcaaaaatggatttctgatgcagtaaga
aaagacttggagaatgttgccaaaatcctaaatgtacaagggtattgtagaatcgatgct
tttgtgagaatctggaaagaggagaagagagtagaaacaattattattgaagtaaattcg
cttccgggaatgactcctgctacttgtattttccatcaagcggcaattaacggttacaaa
ccttacgactttattgataatattctagaatacggaagacaaagaactgaagctaagctt
agcagatag
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