KEGG   Gossypium arboreum (tree cotton): 108453334
Entry
108453334         CDS       T05776                                 
Name
(RefSeq) SART-1 family protein DOT2
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gab00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108453334
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gab03041]
    108453334
   04121 Ubiquitin system [BR:gab04121]
    108453334
Spliceosome [BR:gab03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    108453334
 Complex C
   U4/U6.U5 tri-SnRNP specific factors
    108453334
Ubiquitin system [BR:gab04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    108453334
SSDB
Motif
Pfam: SART-1
Other DBs
NCBI-GeneID: 108453334
NCBI-ProteinID: XP_017606861
LinkDB
Position
10:12322972..12329541
AA seq 907 aa
MEKDRYDREDDASRERRLGGAYSDELEQTEKHRSKDKKKSSREEEKDHRNRDRERDRSKR
SSDEILKEREKDSLEKDRVSTRERRKDDRDEHGKDRAKDSKVREKEKDYDRDKHREKEHE
REREKDRKDRGKDKDRERDRESEKERGKDKSRDRDREKEKERDKAKEREKERDKLKDREK
EREGEKDRDREKGKDRSKQKNRETDLEKERSRDRDNVVKNHEEDYEGSKDGELALDYEDR
RDKDEAELNAGSNASLVQASSSELEERIVRMKEVRLKKKSEGLSEVSAWVSRSRKLEDKR
NAEKEKALQLSKIFEEQDNFVQGEDEDEEADNRPSHDLGGVKVLHGLDKVMDGGAVVLTL
KDQSILADGDLNEDVDMLENIEIGEQKQRDEAYKAAKKKTGVYDDKFNEDPGSEKKILPQ
YDDPVADEGVTLDERGRFTGEAEKKLDELRKRLLGVPTNNRVEDLNNVGKVSSDYYTQEE
MLRFKKPKKKKALRKKEKLDIDALEAEAVSAGLGAGDLGSRNDSRRQAIKEEEARSEAEK
RNNAYQAAFAKADEASKSLRLEQTLTVKPEEDENQVFADDEEDLYKSLEKARRLALKKQE
EKSGPQAVALLAATSASNQTTDDQNTSTGEAQENKVVITEMEEFVWGLQLDEEAHKPDSE
DVFMDEDEVPGASEQDRENGENEVGGWTEVVDTSADEKPANEDNNEVVPDETIHEIAVGK
GLSGALKLLKDRGTLKETIEWGGRNMDKKKSKLVGIVDDDHETDNRFKDIRIERTDEFGR
IVTPKEAFRMLSHKFHGKGPGKMKQEKRMKQYQEELKLKQMKNSDTPSLSVERMREAQAQ
LKTPYLVLSGHVKPGQTSDPASGFATVEKDFPGGLTPMLGDRKVEHFLGIKRKAEAGNSG
TPKKPKT
NT seq 2724 nt   +upstreamnt  +downstreamnt
atggagaaggatcgatatgatagggaagatgatgcttctagagaacgcaggcttggagga
gcctacagtgatgaattagagcaaaccgaaaagcatcggagtaaggacaagaagaagagc
agtcgagaagaagaaaaggatcatcgaaatagggatagagaacgggaccgttctaagaga
agcagtgatgagatcttgaaagaaagggagaaagattccttggagaaggatagagtgtca
accagggagaggaggaaggatgacagagatgagcacgggaaagacagagctaaagatagt
aaggtgagggaaaaagagaaagattatgacagggataagcatagagaaaaagaacatgag
cgtgagagagaaaaggaccgaaaggatcgaggaaaggataaggacagggagagggatagg
gagtctgagaaggaaaggggaaaggacaaaagtagagatagggacagagaaaaggaaaag
gaaagagacaaggccaaggaaagggaaaaggagagagacaaacttaaggatcgagagaag
gagagggaaggagagaaggatagagatagagagaagggaaaagatagaagtaaacagaaa
aatagagagacggacctagagaaggagagatcaagagatagggacaatgtggtcaaaaac
catgaggaagattatgaaggaagcaaagatggagaacttgcgttagactatgaagatcgt
agagataaggatgaagctgaactgaatgctggaagcaatgctagtttagtgcaggcatct
tcatcagagctcgaggagcgcatagtgagaatgaaagaggtcagattgaaaaagaaatct
gaaggtctctcagaggtttcagcatgggttagtagaagtcgtaagcttgaggacaaaagg
aatgctgaaaaggagaaagctttgcagctatcaaagatttttgaagagcaggataatttc
gttcaaggagaagatgaagatgaggaagctgataatcgccctagtcatgatctaggaggg
gttaaagttcttcatggccttgacaaagtgatggatggtggagctgtcgttttaacactc
aaagatcagagcatacttgctgatggtgaccttaatgaagatgttgatatgcttgaaaat
attgaaattggagagcagaagcagcgggatgaggcttacaaggctgcaaagaagaaaacc
ggggtttatgatgataagttcaacgaagatcctggttctgagaaaaaaatactgccacaa
tatgatgatccagttgcagatgagggtgtaactctggatgaaagggggcgctttactggt
gaagctgaaaagaaattagatgagctgcgtaaaaggttactaggtgttcccactaataac
cgtgttgaagatctgaataatgttgggaaggtttcatcggattattacacccaagaggaa
atgcttcgatttaaaaagcccaaaaagaagaaagctttgcggaagaaagagaagttggat
atagatgcccttgaagcagaagctgtctctgccgggctgggtgctggagaccttggatct
aggaatgactctagaagacaagcaattaaagaagaggaggccagatccgaggctgaaaag
agaaataatgcataccaagcagcatttgccaaagcagatgaggcatcaaaatcactgcgg
ctcgaacaaactcttacagttaaacctgaggaagatgaaaatcaggtttttgctgatgat
gaagaggatctttataaatcccttgaaaaagcaaggaggttggctcttaaaaagcaagaa
gaaaaatcaggtccacaagctgtagcgctccttgctgccacatctgctagcaatcaaact
acagatgatcaaaatacctcaactggagaggcacaagaaaacaaggttgtgatcacagag
atggaggagtttgtatggggtcttcagcttgatgaagaagcccataagcctgacagtgaa
gatgtcttcatggatgaggatgaagtgccaggagcttctgaacaagatagagaaaatgga
gaaaacgaggtgggtggatggacagaggtcgttgatactagtgctgatgaaaaacctgct
aatgaggacaacaatgaggttgttccagatgaaaccattcacgaaattgcggttggcaaa
ggattatcaggtgcgctgaagctgcttaaagatcgaggaacacttaaagaaactattgaa
tggggtggccgaaacatggacaagaaaaagagcaaacttgttggcattgtagacgatgat
cacgaaactgataatagatttaaagatattcgcattgaaaggacagatgaatttggtcga
attgtgactcctaaggaagccttccggatgctttctcataaatttcatggcaaggggcct
ggcaaaatgaagcaagaaaagcgaatgaagcaatatcaggaagagttgaagctgaagcaa
atgaaaaattcagatacaccttcactttcagtggagaggatgagggaagctcaagctcag
ctgaaaacaccctaccttgtccttagtggtcacgtcaaaccagggcaaactagtgatcct
gcaagtggctttgctactgttgagaaggattttccgggaggcttgacgcctatgcttggt
gatagaaaggttgagcatttcttgggaatcaagcgcaaggctgaggcagggaattcaggc
acaccaaagaagcctaaaacttga

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