Gossypium arboreum (tree cotton): 108468809
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Entry
108468809 CDS
T05776
Name
(RefSeq) histidine--tRNA ligase, cytoplasmic
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108468809
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gab01007
]
108468809
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gab03016
]
108468809
Enzymes [BR:
gab01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
108468809
Amino acid related enzymes [BR:
gab01007
]
Aminoacyl-tRNA synthetase
Class II (A)
108468809
Transfer RNA biogenesis [BR:
gab03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
108468809
Prokaryotic type
108468809
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
HGTP_anticodon2
Lyase_aromatic
tRNA-synt_2b
Motif
Other DBs
NCBI-GeneID:
108468809
NCBI-ProteinID:
XP_017625154
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All DBs
Position
3:complement(40508889..40513338)
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AA seq
741 aa
AA seq
DB search
MSSLLESCKLMDQSSSALSTVAIASAALSCEAARANLSAFDLTDSGDGSVSKEDIGVSSD
IKVLLNGSKLAVSSNKGDDKVNTDSFSKIPVVYGNVREAVKSLHSVIRVVSNSGEKLGGK
VLHLCFELRNLGEDSLERVRSNLGSVGVEGLKGIFEKECLSEESLRNGVKLAVEAGLEKD
YVKLVKDVELVLRIVWKIVAWEAVSAFFVLEGVEFLNEKTGGKGGEFDGGNVKAEKKKKK
KVLLGKGTSVIVEMIKDRLMSKGEGLEKIVEEFLSFLDPKSADFDGLLKKVMEILESNES
RRIPKTPKGTRDFAKEQMTIRKKAFSIITKVFERHCATALDTPAFELKETLTGKYGEDSK
LIYDLADQGGELCSLRYDLTVPFSRYVAMNGLTSFKRYHIDKVWRRDNPSKGRYREFYQC
DFDIAGQYEKMGPDFEVVRILSEVLNALNIGDYEIKLNHRKLLDGVLEICGVPPAKFRTI
CSSIDKLDKQSFEQVKKEMVEEKGLSVETADKIGTFVKIRGPPLELLSKIMGGTEGSELL
KHNASKEALGDLSILFDALYKSRCIDKVVFDLSLARGLDYYTGVIFEAAFKGGVQVGSIG
AGGRYDNLIGNFGTKQVPAVGMSLGIERVLTIMEEKAQNQAVRATETQVLVAILGDKLAV
AAELVSELWDVDIKAEYKVHKKVMKHIEYAIDSKIPWMVIVGERELNEGIVKLKNIETTT
EEAIPRSNLVGELQQRLKLDP
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccttacttgaatcatgcaagcttatggaccaaagctcctcagctctatccacc
gtcgccatagcatctgccgccctctcctgcgaggccgcaagggctaacttatcagctttc
gacttgaccgattcgggcgacggatccgtttccaaagaagacatcggggtttctagcgac
atcaaagtcttacttaacggttccaaattggcagtgagttctaataaaggtgatgataaa
gttaacacagactcgttttctaagatccctgttgtttatggaaatgtgagggaagctgtt
aagagcttgcattctgttattcgtgtggtttcgaattcgggcgagaagttagggggaaaa
gtactgcatttgtgctttgaattgaggaatttaggggaggatagtttggaaagagtgaga
tcgaatttgggttcagttggtgttgagggtttaaagggtatttttgaaaaggagtgttta
agtgaggaaagtttgagaaatggagttaaactggctgtggaagctgggctggagaaagat
tatgtgaagttggtgaaggatgtggagttggttttgcggattgtatggaaaattgttgcg
tgggaggctgtcagcgcatttttcgtgcttgaaggtgttgagtttttgaatgagaagact
ggtggaaaaggaggagagtttgatggagggaatgtgaaagcggaaaagaagaaaaaaaag
aaggttttgcttgggaagggaactagtgttattgtggagatgataaaggataggttgatg
agtaagggagagggtttagagaaaatagttgaggaatttttatcatttttagatccaaaa
agtgcagattttgatgggttgttgaagaaggtgatggagattttggagagcaatgaaagt
agaagaatccccaagacccctaagggtactcgggattttgcgaaagagcaaatgacaata
agaaagaaagccttttctattataacaaaggtttttgagaggcattgtgccactgccctg
gatactcctgctttcgaattgaaggagactcttaccggaaaatatggggaggattcaaaa
ttgatttatgatcttgcagaccagggtggagagctttgttctctacgatatgatttaact
gttccattttctcggtatgtggcaatgaatggtctcacctcatttaaaagataccacata
gataaagtttggagaagggataacccatctaaagggagatatagagaattttatcaatgt
gattttgatattgctggtcaatatgaaaagatgggtcctgactttgaggttgtaagaatt
ttgtctgaagtactaaatgcactaaacattggggattatgagataaaattgaaccaccga
aagttacttgatggagtgctggaaatctgcggtgtgccaccagcaaaatttagaactatt
tgttcaagtattgacaagctagacaaacaatcctttgaacaggttaaaaaggaaatggtg
gaagagaaggggttatctgttgagacagctgataaaattggcacttttgtgaagataaga
ggacctcctctggaattattgtcaaagattatgggaggaactgagggtagtgagcttctt
aaacacaatgcttccaaagaagcattaggtgacttgtccattttatttgatgctttgtat
aaatcaaggtgcatagacaaagtggttttcgatttgagtctcgccagaggtcttgattat
tatactggtgtcatatttgaagctgctttcaaaggaggtgtgcaggttggttcaattggt
gctggtggacgttatgacaatctgatcgggaattttggcacaaagcaggttccggccgtt
ggcatgagtcttggaatcgaacgagtgttgaccataatggaagagaaagcacagaaccag
gcagtccgagccacggaaacccaagttttggttgctatcctgggggataaactcgctgta
gctgcagaattggtcagtgagctttgggacgtagacatcaaagcagaatataaggttcat
aaaaaggtgatgaagcacatcgaatatgccatagactcaaagatcccttggatggtgatc
gtgggcgagcgagagctgaatgaagggatcgtaaaattgaaaaacatcgaaactaccacc
gaggaagcgattcctagaagtaatcttgttggtgaactacagcaacgattgaagttggac
ccatga
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