Gossypium arboreum (tree cotton): 108470780
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Entry
108470780 CDS
T05776
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 10
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108470780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gab04121
]
108470780
Enzymes [BR:
gab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108470780
Ubiquitin system [BR:
gab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
108470780
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
zf-C3HC4_2
zf-RING_6
ZnF_RZ-type
Pox_Ag35
Motif
Other DBs
NCBI-GeneID:
108470780
NCBI-ProteinID:
XP_017627719
UniProt:
A0A0B0MHD3
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Position
4:66554056..66557336
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AA seq
344 aa
AA seq
DB search
MAKFSVGIDEDGEGPSNRVPKRQRAERVLDIEGSGQEESEQEEEDEESEGEEASEGEEEA
SEESEREEELEESGAEQGAMSPQTSRDGSISITLTDPEVLDCSICYEALTIPVYQCENGH
IACSTCCIKMRNRCPSCMTPIGYSRCRAIEKVLESVKVTCQNTKYGCKEAFSYSMKQKHG
KACLFTPCSCPLPDCDFEGSSEELSAHFGNVHKYSATCFRYDRPASITLGVSEKFLILRE
ERDGSLFILHNKVENLGNVVTLSRIGPSTERGSFYELTVKAPSDGSNLRLQSFTKSTPKR
VDSPQSLGFLLVPSQFSCISRQIKMDLCLGRSDRFSCYQRPGGA
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagttctctgtggggatcgacgaagacggagaagggccaagcaatcgagtccca
aagcgtcaaagggcggagcgtgttcttgatatcgaaggctctggtcaagaagaatccgag
caagaggaagaagacgaagaatctgaaggcgaagaagcatccgaaggagaagaagaagct
tccgaagaatctgaaagagaagaagaattggaggaaagtggagctgagcaaggagcaatg
agccctcagacttctcgagatggatccatttctatcacgttaactgaccctgaagttctt
gattgttctatctgttatgaggccttgactatccctgtttatcagtgtgagaatgggcat
atagcttgctctacctgttgcatcaaaatgaggaatagatgtccatcctgtatgactcca
attggctatagtcgctgcagggcgattgagaaggtattggaatctgtcaaagtgacatgc
caaaacacaaagtacgggtgcaaagaagcattcagttatagcatgaagcagaaacatgga
aaggcatgccttttcactccatgttcatgcccccttcctgattgcgactttgagggttca
tcagaggagttaagtgcacactttggcaatgtacacaagtattctgcaacatgtttccgt
tatgatcgtccagcatccattaccttaggagtttctgagaagttccttattcttcgagag
gagagagatggttctttgttcattcttcacaacaaggttgagaatttggggaatgtagtt
actttgagccggattgggccctcaacggagagaggttccttctatgaactaactgtgaaa
gctccatctgatggaagtaatcttagattacagtccttcacaaagagcactccgaaacga
gttgatagcccacagtcattagggtttctcctggttccaagtcagttctcatgcatttca
cggcagatcaagatggacctctgcctggggcgttctgatcggttttcctgctaccagaga
cctggtggtgcataa
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