Gossypium arboreum (tree cotton): 108486313
Help
Entry
108486313 CDS
T05776
Name
(RefSeq) myosin-17-like isoform X1
KO
K10357
myosin V
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
108486313
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gab03019
]
108486313
04131 Membrane trafficking [BR:
gab04131
]
108486313
03029 Mitochondrial biogenesis [BR:
gab03029
]
108486313
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gab04812
]
108486313
Messenger RNA biogenesis [BR:
gab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
108486313
mRNA cycle factors
P-body specific factors
108486313
Membrane trafficking [BR:
gab04131
]
Others
Actin-binding proteins
Myosins
108486313
Mitochondrial biogenesis [BR:
gab03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
108486313
Cytoskeleton proteins [BR:
gab04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
108486313
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_22
AAA_16
nSTAND3
Tropomyosin
CbiA
AAA_13
Motif
Other DBs
NCBI-GeneID:
108486313
NCBI-ProteinID:
XP_017645789
LinkDB
All DBs
Position
8:complement(59079325..59093381)
Genome browser
AA seq
1534 aa
AA seq
DB search
MPVSLAAPVNIIVGSHVWVEDPALAWVDGEVFKISGEEVHVHTTNGKTAVANISKVFPKD
TEAPPGGVDDMTKLSYLHEPGVLHNLAMRYELNEIYTYTGNILIAINPFQRLPHLYDTHM
MEQYKGAGFGELSPHVFAVADVAYKAMMNEGKSNSILVSGESGAGKTETTKMLMRYLAYL
GGRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAVRT
YLLERSRVCQISNPERNYHCFYLLCAAPPEVREKFKLGDPKSFHYLNQSSCYALDGVDDA
QEYLTTIRAMDIVGISEEEQEAIFCVVAAILHLGNIEFAKGADVDSSVIKDEKSRFHLNM
TAELLKCDIKSLENSLIKRVMVTPEEIITRTLDPVAAFGSRDALSKTIYSRLFDWLVDKI
NFSIGQDPNSKQLIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTK
EEINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLFQTFKNNKRFI
KPKLSRTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQDLLTASKCSFVASLFPPPAEES
SKSSKFSSIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNVLKPAIFENANIIQQLRCGGV
LEAIRISCAGYPTRRTFYEFLHRFGVLAPEILAGNHDDKVACQMILDKMGLKGYQIGKTK
VFLRAGQMAELDARRAEVLGNAARTIQRQIRTYIAWKEFIALRKAAIMLQSHWRGILACK
LYEQLRRGAAALKIQKNFRRHIARESYLTVRQSATTLQTGLRAMTARNEFRFRKQTKAAI
IIQAAFRCHVAYSYYKSLQKAALTTQCGWRRRVARRELRKLKMAARETGALKEAKDKLEK
RVEELTWRLQLEKRLRTDLEEEKAQEIAKLHDALHAVEIQVEEANARVITEQEAARKAIE
EAPPVIKETPVIVEDTEKVNSLAAEVENLKASLLSETKAAEEARNACTDAETRNAELVKK
LEESERKVDQLQESVQRLEEKLANSESEIQVLRQQSLAMSPTGKSLTARQRAMILPRTPE
NGNVLNGETKVPSDTTLALSNAREPESEEKPQKYLNEKQQENQDLLIKCISQNLGFSGSK
PIAACVVYKCLLHWRSFEVERTTVFDRIIQTIASAIEVQDNNDVLAYWLSNSSTLLLLLQ
HTLKASGAASLTPQRRRATSASLFGRMSQGLRASPQSAGLSFLSGRGLGRLDDLRQVEAK
YPALLFKQQLTAFLEKIYGMIRDNLKKEISPLLGLCIQVPRTSRASLVKGRSQSNAVAQQ
ALIAHWQSIVKSLDHYLKIMKSNHVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSN
GEYVKAGLAELEQWCSEATEEYAGSAWDELKHIRQAVGFLVIHQKPKKSLNEITKELCPV
LSIQQLYRISTMYWDDKYGTHSVSSDVIAKMRVMMTEDSNNAVSSSFLLDDDSSIPFSVD
DISKSLQQVDITDIDPPSLIRENSGFGFLLPRSE
NT seq
4605 nt
NT seq
+upstream
nt +downstream
nt
atgccagttagtttggctgctccagttaacattattgtaggttctcatgtatgggttgaa
gatcctgcacttgcatgggttgatggagaagtttttaaaatcagtggtgaagaagttcat
gtccacacaacaaatggaaaaactgctgtggcaaatatctcaaaggtatttccaaaagat
actgaggcacctcccggaggtgtcgatgacatgacgaagctttcatatttgcatgaacct
ggagtgctgcataacttggccatgagatatgaacttaatgaaatctatacatacactgga
aatatcctgattgctataaatccattccaaaggttgccgcacctctatgatactcacatg
atggaacaatataaaggcgctggatttggcgagctgagtcctcatgtttttgctgttgca
gatgttgcatataaggcaatgatgaatgagggaaaaagcaactcaattctcgttagtgga
gaaagtggtgctggtaagactgagactacaaagatgctcatgcgataccttgcatacctt
ggtggtcgatctggagttgaagggcggactgttgaacaacaagttctagaatctaatcct
gttcttgaagcttttggaaatgcaaaaactgttagaaacaacaactcaagtcgctttggt
aaatttgttgagattcaatttgataagaatgggaggatttctggggccgctgttcgtaca
tatttgctggaacggtctcgagtttgtcaaatttcaaatcctgaaagaaattatcactgc
ttttaccttctttgtgcagcacctcctgaggttagagaaaagtttaaattgggagaccct
aaatctttccattacctcaatcaatcgagttgctatgcattggatggggtagatgatgct
caggagtacctcacaactataagggccatggatatagttggaatcagtgaagaagagcag
gaggcaattttttgtgttgtggctgccattttacatcttggaaatattgaatttgcaaag
ggagctgatgttgactcttcagttatcaaggatgagaaatctaggttccatcttaatatg
acagctgaactgctcaagtgtgatatcaagagcttggaaaattcattaataaagcgtgtg
atggttaccccagaagaaattattacaagaactctggatccagttgctgcatttggtagc
agggatgcattatctaaaacaatctattctcgcttgtttgattggcttgtggataagatc
aacttttcaattggacaagatccaaactctaagcaattgattggagtacttgatatttat
gggtttgagagctttaagcttaatagttttgaacagttttgcatcaattttactaatgaa
aaactgcagcagcatttcaatcagcatgtttttaaaatggaacaggaggaatacacaaaa
gaagaaattaattggagctacatagaatttgttgataaccaggatgttttggatttgata
gagaagaaacctggaggaataattgcgctacttgatgaagcttgtatgtttcctaaatcc
acacatgaaacatttgctcagaagttgttccagacattcaaaaacaacaagcgctttatc
aaaccgaaactatctcgtactagttttacaatttctcactatgctggagaggtaacttat
ctggctgatttgttccttgacaagaacaaagattatgtagtggctgaacatcaagatctc
ttgacagcctcaaaatgctcctttgtggctagtttgtttcctcctcctgctgaggagtcc
tcaaaatcatccaaattttcatccattggatcacgctttaagctacaacttcaatctttg
atggagacgttgaattcaacagagcctcactatattagatgtgtgaagccaaacaatgtc
ctcaagcctgctatttttgagaatgccaatataattcagcaattaagatgtggtggtgtt
cttgaggcaattaggatcagctgcgcaggatatccaacaagaagaacattttatgagttt
cttcatcgttttggtgttcttgctccagaaattttggcagggaatcatgatgacaaggtt
gcatgtcaaatgatccttgacaagatgggattgaaaggttatcagataggtaagaccaaa
gttttccttagagctggtcagatggctgagttagatgccagaagggcagaagtgcttgga
aatgcagccagaaccattcaaagacagattcggacatatattgcatggaaggaattcatt
gcactacggaaagctgcaattatgttgcagtcacattggcgaggtatactagcctgcaag
ctatatgagcagttgagaaggggagcagctgctttgaagattcaaaagaactttaggcgg
cacattgccagggaatcctatttaacagtaaggcagtccgcaaccacattgcagactggc
ttaagggcaatgactgctcggaatgaattcagattcagaaagcaaactaaggctgcaatt
atcattcaggctgctttccgttgccatgttgcatactcttattataagagtctccagaaa
gctgcattaactactcaatgtggttggaggagaagggttgctaggagagagctcagaaag
ctcaagatggctgcccgagaaacaggggcactcaaagaagcaaaagacaagctggaaaaa
cgtgtagaagaacttacatggcgtttgcagcttgagaaacgtttgaggactgatttagaa
gaggagaaggcacaagaaattgccaagttgcatgatgctttgcatgcagtggaaattcaa
gtggaagaagcaaatgctagagtcataacagagcaagaggctgctcggaaagctattgag
gaagctcctccagttattaaggagactcctgttattgttgaggacacagaaaaggttaat
tccttggctgctgaagtagagaatttaaaggcttcgttgctatctgaaacaaaggcagca
gaagaggctcgtaatgcttgtacagatgctgaaaccagaaatgcagagctggtgaagaaa
cttgaagagtctgagcgaaaagtggaccaacttcaggaatcagtgcagaggctggaagag
aagcttgccaattcggaatctgagattcaagtacttcgccagcagtcactggcaatgtct
ccaaccgggaaatctttgactgcaagacaaagagcaatgattcttcctaggacaccggag
aatggaaatgttctaaacggagaaacaaaggtcccatcggatacaactcttgccttatca
aatgcacgtgagcctgaatctgaggaaaagcctcagaaatacctcaatgaaaagcagcag
gagaatcaggacctactgatcaagtgtatatcacaaaatctgggattttccgggagcaag
ccgattgctgcttgtgttgtatacaaatgtcttcttcactggaggtcatttgaagttgaa
agaacaactgtttttgaccgcatcattcaaacaatagcttctgcaatagaggtccaggac
aataatgatgtcttagcctattggttatctaattcatcgacattgttactgctgctccaa
cacacacttaaagcaagtggagctgccagtttgacaccacaaagacgaagagcaacatca
gcttcactctttgggaggatgtctcaaggtctacgggcatctccccaaagtgctggactt
tcatttctcagtggtcgtgggcttggtagattagatgacttacggcaagttgaggccaag
tatcctgcattactgtttaagcagcagcttactgccttccttgagaagatatatggaatg
ataagagacaatctgaagaaagagatctctccattgcttggcttgtgtattcaggttcct
aggacatcacgggcaagtttggtgaaggggcgttctcaatcaaatgctgttgctcagcaa
gctttaattgctcattggcaaagcattgtgaaaagcttggatcactatttgaagataatg
aaatctaaccacgtacctcccttcctcgtccgtaaagtattcactcaaattttctcattc
atcaacgttcagctattcaacagtcttcttttgagacgtgagtgctgctcattcagtaat
ggggagtatgtgaaagctggtctggctgaattagagcagtggtgcagtgaggcaactgag
gaatatgcaggttcggcatgggatgaactgaaacacataagacaggctgttggattcctg
gttattcatcaaaaacccaaaaagtccttgaatgaaataactaaagaactttgcccggta
cttagcattcaacagttatacagaatcagcacaatgtattgggatgacaaatatggcaca
catagcgtgtcatcggatgtcattgcaaaaatgagagttatgatgaccgaggactccaac
aatgctgttagtagttctttcctattagacgatgactcaagcatcccattttcggtggat
gacatctccaagtccttacaacaagtggacataactgatattgatcccccgtcactaatt
cgagaaaactctggttttgggttcttacttccacgttcggagtga
DBGET
integrated database retrieval system
