KEGG   Gossypium arboreum (tree cotton): 108488500
Entry
108488500         CDS       T05776                                 
Name
(RefSeq) exonuclease 1
  KO
K10746  exonuclease 1 [EC:3.1.-.-]
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:gab00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    108488500
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gab03032]
    108488500
   03400 DNA repair and recombination proteins [BR:gab03400]
    108488500
DNA replication proteins [BR:gab03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    108488500
DNA repair and recombination proteins [BR:gab03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Other MMR factors
     108488500
SSDB
Motif
Pfam: XPG_N XPG_I XPG_I_2 TPR_1 MIT TPR_8 TPR_2
Other DBs
NCBI-GeneID: 108488500
NCBI-ProteinID: XP_017648266
LinkDB
Position
9:62279316..62284842
AA seq 691 aa
MGIQGLLPLLKSIMVPIHIKELEGCSVAIDTYSWLHKGALSCSTQLCKGLPTSRHIEYCM
HRVNLLRHHGVKPVLVFDGGLLPMKIEQENKRARARKENLARAVEHESCGNSAAAYECYQ
KAVDISPSIAHELIMVLKRENVCYVVAPYEADAQMTFLAISKQVDAVITEDSDLIPFGCP
RVIFKMDKFGQGVEFKSSMLQQNQELSFAGFTKQMLLEMCILSGCDYLQSLPGMGLRRAH
ALMKKFKSHDKVIKHLRYSTVSVPPLYEESFKKAILTFQCQRVYDPITEDIVHLSDISDN
IGDDLDFLGPLIPQQIAQGIARGDLDPFTQIPFQAVSDSSQLALDRNLRLKSFKPESERK
RLDLPVQKNLLTNYFCFASVEAKRNFKAPRVSPKHSSPVANSSTSPESDKDITVEDGSCQ
IDTLLSASPDFKNTNSIEENGFITKLPEYSESSNPDIEAKVDTTRSPDHVLPLESDWPTI
RPPTASDKEHDNNTVPDAAKSKTIADSRKGIVTSRYFQKKQVDINDQEDKQGKNCCRGGI
TNQFPETGNLDGYGNTYSKGMASKRKNSFEYVETENVNPKQIYTDASCDGNADCGPNLET
FGETKTGEAKFGSNISHLGRYSDVAEKSMERFVSVISSFRFSSPGSRASGLRAPLKDAWN
TCNNRSSAAVDFNQFAYVPKNKKAKLASRRF
NT seq 2076 nt   +upstreamnt  +downstreamnt
atgggaatacaagggcttttgcctctattgaaatcgattatggtaccaatccatatcaag
gagcttgaaggctgtagcgtagctattgacacctattcttggctccacaaaggagccttg
tcttgcagcactcagctctgtaaaggattacccacctccaggcacattgagtactgtatg
catagggtaaatttgctgcgacatcatggtgttaaaccagttctcgtctttgatggaggt
cttcttccaatgaagattgagcaagagaacaagcgtgcaagggcaaggaaggaaaatctt
gcacgagcagttgaacatgagtcatgtgggaattctgctgctgcttatgagtgctaccaa
aaagctgttgacatttcaccttcaattgcacatgaactaatcatggtcttgaagcgggag
aatgtttgttatgttgtggcaccttatgaggcagatgcacaaatgactttcttggccatt
agcaaacaggttgatgcagttatcaccgaggattctgatcttataccctttggctgtcct
agagttatctttaaaatggataagtttgggcaaggtgttgagttcaagtcttccatgcta
cagcaaaaccaggagctaagctttgctggattcactaaacagatgctgcttgaaatgtgt
atcctaagtggttgtgactatttgcagtcactgccaggaatggggctcagaagggcccat
gcacttatgaaaaaattcaaaagtcatgacaaggtgattaagcacctgaggtacagcact
gtttcagttcctccgttgtatgaagaatcattcaagaaagcaatattaacatttcagtgc
caacgagtctatgatccgatcacagaagatattgtgcatttatctgacatatctgacaac
attggtgatgatttggactttttaggcccgctgataccccaacaaatagctcaaggcata
gcaagaggtgatcttgatccatttactcaaataccatttcaggctgtaagtgatagttct
cagctggcacttgatagaaatttacggctgaaaagttttaaacccgagagtgaaagaaaa
aggctagatttgcctgtgcaaaagaacctcctgaccaactatttctgctttgcatctgtt
gaagcaaaaagaaacttcaaggcccctcgagtatcacctaagcattcaagtccggttgct
aattcttctaccagtcctgagtctgacaaagacattactgtggaagatggttcttgccaa
attgataccctgttgtcagcctctcctgacttcaagaatactaacagcattgaagaaaat
ggtttcattaccaagctccctgagtattcagaatcttcaaatcctgatatagaagccaag
gtggatacaaccagaagccctgaccatgtgttgccactagaatctgactggccaacgatc
agacctcctacagcttcagacaaagagcatgataataatacggtcccagatgcagctaaa
agcaaaacaatagcagatagcagaaagggcattgtaacaagtcgttactttcagaagaag
caagtcgacataaatgatcaggaagataaacaaggaaaaaattgttgcaggggtggtatt
accaatcagtttcctgagactggcaatcttgatggttatgggaatacctattctaaggga
atggcttcaaaaaggaagaactcctttgaatatgttgaaacagaaaatgtgaatcccaag
caaatctacactgatgcatcctgtgatggtaacgctgattgtggtcctaatcttgaaaca
tttggggagacaaaaactggagaggcaaaatttggatccaacatttcacatttaggccgt
tattctgacgtagcagagaaatccatggaaagatttgtttcagtaatatcatcatttaga
ttttcatcacccggttctcgtgctagtggtcttcgagcgcctttgaaagatgcttggaac
acatgtaacaacaggtcatctgctgctgtggattttaaccagtttgcttatgttccaaaa
aacaagaaggccaaattagcatcgcgtagattttga

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