Gottfriedia acidiceleris: MY490_02050
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Entry
MY490_02050 CDS
T08082
Name
(GenBank) RNA polymerase sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
gaj
Gottfriedia acidiceleris
Brite
KEGG Orthology (KO) [BR:
gaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gaj03021
]
MY490_02050
Transcription machinery [BR:
gaj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MY490_02050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
DUF4835
HTH_30
HTH_17
LON_substr_bdg
Motif
Other DBs
NCBI-ProteinID:
UPM54677
LinkDB
All DBs
Position
complement(427344..427829)
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AA seq
161 aa
AA seq
DB search
MKGKSNLEKELVDFIINNKDDFYRLAYSYVKNSEDAVDILQDSIHKAISSKDKLKNEQSL
KSWFYRIVVNTSLDFLRKQKKVTVMDEETIELYSSGQDDNYTDIDLERSLESLPTKYRAV
IVLRYFEDLKIEEVAEILQESPNTIKTRLYKALEILRIKMK
NT seq
486 nt
NT seq
+upstream
nt +downstream
nt
atgaaggggaaatctaacttagaaaaggaacttgtagattttattataaataataaagat
gatttttatcgattagcttatagctacgttaaaaattcagaagatgcggtggatatatta
caagattctattcataaagccatttcctcaaaagataaattaaaaaatgaacaatcttta
aaaagttggttttatagaattgtagtaaatacatcgttagattttttaagaaaacaaaaa
aaagtaactgtaatggatgaagaaacgattgagttatattcttcaggacaggatgataat
tatacggatattgatttagaaagatcattagaatctttaccaactaaatatcgggctgta
attgtcctcaggtatttcgaagacttaaagattgaagaagttgctgaaattttacaggag
agtccaaatactataaaaactcgtttatataaagctttagaaatactccggattaaaatg
aaatga
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