Gottfriedia acidiceleris: MY490_18655
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Entry
MY490_18655 CDS
T08082
Name
(GenBank) hypothetical protein
KO
K20480
HTH-type transcriptional regulator, quorum sensing regulator NprR
Organism
gaj
Gottfriedia acidiceleris
Pathway
gaj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
gaj00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MY490_18655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gaj03000
]
MY490_18655
Transcription factors [BR:
gaj03000
]
Prokaryotic type
Helix-turn-helix
Other families
MY490_18655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_3
TPR_2
TPR_12
TPR_1
TPR_8
TPR_10
TPR_14
FliG_M
HTH_31
TPR_16
HTH_19
Motif
Other DBs
NCBI-ProteinID:
UPM53775
LinkDB
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Position
complement(3948406..3949665)
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AA seq
419 aa
AA seq
DB search
MIEGEVIKFYRIKAGLTQEELGKGICSSKHVGKIERGNTSYSSEIITLFSERLQIDIQKE
IANFENLKKKLQNWHTAIIKLRMKEVDSYKKELEISPFINSPKYDALYQLLLARYYLLKN
DYKNTYTIILSIQRNYKDLPPFERNLLLHVIGIYYLNNYNNSSTENHHKAIQTLKKIDLN
EYGNPEYYYHLAVAYGWVDSKVMAYVYAEKALKYFKDTSNYLRAINAESIMLLQSSNDGH
LDFKKLKQSYKNLIHDSETLNAPDKTGMLLNNFALEYFKRKDYEKAQKYYKAALQLEKKP
SVIYLQRLNNYLKSSFEGKLMRKSALLNSAQKGLTIANNLKNQHYQILFTLLIYLIENNM
KEYIQYIEKTAFPYFKSRNHTIFMKRYGKVLYDYYVKSKEFEKAVEMSNFLIDVIKIHN
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaggagaagttataaaattttatcgtattaaggccggactaacacaagaagaa
ctaggaaaaggaatctgctcttccaagcacgtaggaaaaattgaaagagggaatacctcc
tactcatctgagattattaccttgttttctgaacgattacaaattgatattcaaaaagaa
attgctaactttgaaaatcttaaaaagaaactacaaaactggcatacagcaatcattaaa
ctaagaatgaaggaagttgattcatataaaaaggagctagaaataagcccttttattaat
tcgccaaaatatgatgctttgtatcaattgctgctagcaagatattatctcttaaagaac
gactataaaaacacttatacaattattctaagtatacaaagaaactataaagatttacct
ccttttgaaagaaatctccttttgcatgtaataggaatttattatttaaataattacaat
aattcaagtacagagaatcatcataaagcaatacaaactttaaagaagattgatctaaac
gaatatggaaatccagaatactactatcatttagcagtagcatatggatgggttgattct
aaggtaatggcttatgtatacgcagaaaaagctcttaaatattttaaagatacaagtaat
tatttacgtgccataaatgctgaatcaataatgcttttacaatcaagcaacgatgggcac
ttagactttaaaaaattgaaacaatcatataagaatctgattcatgatagtgaaacgctc
aatgcaccagataaaacagggatgttattaaataactttgctttggaatattttaaaaga
aaagattatgaaaaagcgcaaaaatattataaagcagcattacaattggagaaaaagcca
tcggttatttatcttcaacgacttaataattatcttaaaagttcatttgaaggtaaatta
atgcgcaaatctgctttattaaatagtgctcaaaaaggtctaactatcgcgaataattta
aagaatcaacattatcaaattcttttcactttactgatctatttgattgaaaataatatg
aaagagtatatacagtacatagaaaagaccgcttttccatactttaaatcacggaatcat
actattttcatgaaacgatatggtaaagtgttatatgattattatgtgaaatcaaaagag
tttgagaaggcagttgaaatgtctaacttcttaatagatgttattaaaatacataactaa
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