Glycocaulis alkaliphilus: X907_2333
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Entry
X907_2333 CDS
T05786
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
gak
Glycocaulis alkaliphilus
Pathway
gak03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
X907_2333
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gak03400
]
X907_2333
Enzymes [BR:
gak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
X907_2333
DNA repair and recombination proteins [BR:
gak03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
X907_2333
RecFOR pathway proteins
X907_2333
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
AAA_14
TIP49
nSTAND3
AAA_3
Rad17
NTPase_1
AAA_22
AAA_18
TsaE
Mg_chelatase
DUF815
AAA_17
RNA_helicase
IstB_IS21
AAA_28
AAA_24
NB-ARC
DUF2336
NACHT
AAA_PrkA
AAA_19
AAA_33
Cytidylate_kin
bpMoxR
Zeta_toxin
ABC_tran
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AZU04848
UniProt:
A0A3T0EC32
LinkDB
All DBs
Position
complement(2408049..2409080)
Genome browser
AA seq
343 aa
AA seq
DB search
MTEADRIISTEPAPGDGRDKALRPLSFDEFVGQRAAIDNLKVFVSAAASRGEALDHVLLS
GPPGLGKTTLAQIVARELGVNFRATSGPVIARAGDLAAILTNLEERDVLFIDEIHRLLPV
VEEILYPAMEDFALDLVIGEGPSARTVRIDLPPFTLVGATTRAGLLATPLRDRFGVPVRL
EFYGEKELTSIVARAAGKLGAAIEPDGAREIARRARGTPRVAGRLLRRVRDFAEADGETS
ISAKVADLALKRLEVDEVGLDSLDRRYLRVLIEGFAGGPAGVETLAAACAEARDALEEVV
EPFLIQQGFIQRTPRGRIAAPRAWTHMGLEPPRSSPDLFGGDK
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaggcagaccgcatcatctcaaccgaacccgcgccgggggacggacgcgacaag
gcgctgcggcccttgagctttgacgagtttgtcgggcagcgcgcggccatcgacaacctc
aaggtcttcgtaagcgccgccgccagccgcggcgaagcgctcgatcacgtcctgctgtcg
ggtccgccggggctgggcaagaccacgctggcgcagatcgtggcgcgtgagctcggcgtc
aatttccgcgccacctccggccctgtgattgcccgcgcgggtgatctggctgcgatcctg
accaatctggaagagcgcgacgtgcttttcatagatgaaatccaccgcctgctgccggtg
gtggaggaaatcctctaccccgccatggaggattttgcgctcgatctcgtgatcggcgaa
gggccgagcgcgcgcacggtgcgcatcgatctgccacccttcactcttgttggcgcaacc
acgcgggcgggccttctggcgacgcccttgcgtgaccggttcggcgtgcccgtgcggctg
gaattttatggcgagaaggaactgaccagcatcgtcgcccgcgccgccgggaagctcggc
gcagccattgaacccgatggcgcacgggaaattgcgcggcgcgccagaggcacgccgcgc
gtggcaggccgcctgctgcgccgggtgcgcgactttgccgaggccgatggcgagacgagc
atttccgccaaggtcgcagacctggctctgaaacgccttgaggtggatgaggtgggcttg
gacagtctcgaccgtcgatatctgcgcgtcctcattgaaggctttgccggcgggcctgcc
ggcgtggaaacgctggcggctgcctgcgccgaggcgcgcgatgcgctcgaagaagtggtc
gaacccttcctcatccagcagggcttcatccagcgcacgccaaggggccgcatcgccgcc
ccgcgcgcctggacacatatggggctggagccgccgcgctcttcgccggacctctttgga
ggcgataaatga
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