Gordonia amicalis: IHQ52_05380
Help
Entry
IHQ52_05380 CDS
T08222
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
gami
Gordonia amicalis
Pathway
gami03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
gami00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
IHQ52_05380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gami03400
]
IHQ52_05380
DNA repair and recombination proteins [BR:
gami03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
IHQ52_05380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
DUF755
HC2
Motif
Other DBs
NCBI-ProteinID:
UKO92818
LinkDB
All DBs
Position
1177186..1178178
Genome browser
AA seq
330 aa
AA seq
DB search
MADMRSIWKGDLSFGLVNVPVKVYSATESHDRKSYQVDSSDGTRIRYRRVREGTDTEVDY
SDIANAYESESGETVILTKDDLSTLPVQKSPEISILEFVPVEQVDPIYFDKPYYLEPSSK
SPKAYVLLAKALEETDRLAIATFTLRNRTRVAALRVVDGVMTLQTLLWPDEVRKPDFGFL
DEDTEIRDQELKMAASLIESMASDYDPSEFEDTYQNELAKLIEAKAEGSEAFPESEEEKP
GEEDSEVADLLAALRASVKDRGASDEDEAEKKDTAAKKAAKKAAKKAPAKKAAAKKAPAK
KAASKSSSGSSGSKSTAKKAPAKKASRRAS
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggccgacatgcgctcgatctggaagggcgatctcagctttggcctggtgaatgtaccg
gtcaaggtctattccgcgacggagagtcacgaccgcaagtcctaccaggtcgactcctcc
gacggcacccgcatccgataccggcgcgtgcgcgagggaaccgacaccgaggtcgactac
tccgacatcgccaacgcctacgaatcggaatcgggcgagacggtgatcctgaccaaggac
gacctgtcgacgctgccggtgcagaagagcccggagatctcgatcctcgagttcgtgccg
gtcgaacaggtcgatccgatctacttcgacaagccctattacctggagccgtcgtcgaag
tcgcccaaggcctacgtgctgttggccaaggcgctcgaggaaaccgaccgcctggcgatc
gcgacgttcaccctgcggaaccgcacgcgggtcgcggcgctgcgcgtcgtcgacggcgtc
atgaccctgcagacactcctgtggccggatgaagttcgcaaacccgacttcggttttctc
gacgaggacaccgagatccgcgaccaggaactgaagatggcggcgtcgctgatcgagtcg
atggcctccgactacgatccgtccgagttcgaggacacctatcagaacgagctggccaaa
ctcatcgaggcgaaagccgagggcagcgaggcgttccccgagtcggaggaggagaagccc
ggcgaggaggattccgaggtcgccgatctgcttgccgctctgcgtgcctcggtgaaggac
cgcggggcttccgacgaggacgaggccgagaagaaggacacggccgcgaagaaggccgcg
aagaaggctgccaagaaggcacccgccaagaaggccgcggcgaagaaggctcccgccaag
aaggcggcctcgaagagcagctctggatcgtcgggctccaagagcacggcgaagaaggcg
cccgccaagaaggcctcccgccgggcgagctga
DBGET
integrated database retrieval system
