Gracilinanus agilis (agile gracile opossum): 123232229
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Entry
123232229 CDS
T07702
Symbol
LSM7
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas03018
RNA degradation
gas03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123232229 (LSM7)
09123 Folding, sorting and degradation
03018 RNA degradation
123232229 (LSM7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gas03019
]
123232229 (LSM7)
03041 Spliceosome [BR:
gas03041
]
123232229 (LSM7)
Messenger RNA biogenesis [BR:
gas03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123232229 (LSM7)
mRNA degradation factors
5'-3' decay
Lsm complex
123232229 (LSM7)
Spliceosome [BR:
gas03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
123232229 (LSM7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
123232229
NCBI-ProteinID:
XP_044514545
LinkDB
All DBs
Position
1:728607183..728619988
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AA seq
103 aa
AA seq
DB search
MADKEKKKKESILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDD
QYKLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQQQDG
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atggcggataaggagaagaagaagaaggagagcatcttggacctgtccaagtacatcgac
aagaccatccgcgtgaagttccagggaggccgcgaggccagtggaatcttaaaaggattt
gaccctctgctcaatttggtacttgatggcaccattgaatatatgagagatcctgatgac
cagtacaagctcactgaagacacacgccagctaggattagtggtctgcagagggacctca
gtggtgctgatttgccctcaggatggcatggaggccattccaaaccctttcatccagcag
caggatggatag
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