Gracilinanus agilis (agile gracile opossum): 123236347
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Entry
123236347 CDS
T07702
Symbol
EXOSC1
Name
(RefSeq) exosome complex component CSL4 isoform X1
KO
K07573
exosome complex component CSL4
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123236347 (EXOSC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gas03019
]
123236347 (EXOSC1)
Messenger RNA biogenesis [BR:
gas03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
123236347 (EXOSC1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
123236347 (EXOSC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
123236347
NCBI-ProteinID:
XP_044518596
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All DBs
Position
2:complement(648168790..648175132)
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AA seq
196 aa
AA seq
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MAPPLRYCVPGERLCNVEEASPGSGTYTRHGYIFSSLSGCLVKTSDNGELPVVSVTRETE
SQLLPDVGTIVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKEDVRATEKDKVEIYK
SFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESAGVQMVPISWCEMQCPRTHT
KEFRKVARVQPEFLQT
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgccgttgaggtactgcgtcccaggcgagcgactgtgtaacgtggaggaagcc
agccccggcagcggcacctacactcggcacggctacatcttttcctcgctctctggctgt
ctggtgaagacgagcgacaacggcgagcttccagtggtgtcagtgacgagagagaccgag
tcccagctgcttccagatgtgggaacgatcgtaacctgtaaggtctccagcattaattct
cgatttgccaaagttcatatcttatatgtgggatccacacctctcaagaactcttttaga
ggaactatcaggaaggaagatgttcgggctactgaaaaagacaaggttgaaatatataag
agttttcgcccaggtgacattgtgctggctaaagtgatttccctcggtgatgcacaatcc
aactacctgttgacaactgcagaaaatgagctgggagtggtggtggcccatagtgaatca
gcaggtgtccagatggtgcccatcagctggtgtgagatgcagtgccctaggacacacact
aaagaattccgcaaggttgcccgagtacagccagagttcctgcagacgtag
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