Gasterosteus aculeatus (three-spined stickleback): 120812098
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Entry
120812098 CDS
T07457
Name
(RefSeq) LOW QUALITY PROTEIN: rho GTPase-activating protein 21
KO
K20315
Rho GTPase-activating protein 21/23
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gat04131
]
120812098
Membrane trafficking [BR:
gat04131
]
Endosome - Golgi transport
Others
Others
120812098
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
120812098
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH_9
PDZ_6
PH
PDZ
PDZ_2
PH_11
Motif
Other DBs
NCBI-GeneID:
120812098
NCBI-ProteinID:
XP_040023858
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Position
XXI:15278174..15320381
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AA seq
1962 aa
AA seq
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MAHLKVLDCMINNNWSLICDLYCAWSDQAKQKDGRDQSEASAVASLGPDEEPFSWPGPKT
LRLRRTSQGFGFTLRHFIVYPPESAVHNSLKVTPRGFGYSDEDNGSRGRQRNRLEPMDTI
FVKQVKEGGPAHGAGLCTGDRIVKVNGESIIGKTYSQVIALIQNSDASLELCVMPKDEDI
LQLFSRDITALAYSQDAYLKGNDAYSGNAQNIPEPPPICYPRIEVKSAAMAQTSEPAAVT
ESPPGPAQGPARRGGAAEKSPAAPPQGSKSQTAVCVCSESVRTAAMPPDPVDRGSRVARA
GPSHRTEENRHSHSAESSAAPRPLVPSAPGGAQVRYPSSRPADSPACSPPARPGAPCPDL
LSPAVRATAASPDTFSSAASPGGNHYSPSPTTPSTSPHQNIDWKNYTTYKDYIDTKRLHT
YGCRTIQERLDSLRAAANSTSAYAQQRTPPAPSTPPRGAPGSQVRWRSTSIERGVDPSSE
GAAGTSLRSVSQERLGGGGGRAPPGVPWPRSASEDALPFSSPAGVPEPRARSCDYLGQRP
GEPAGSAAFGDRAVLEDRMMLCRGEEARASRQGAGPRAMPHLNRSLTGREGGLSNSAPVF
TKFTTDIAPTPRTDGVVMRPSRLSVKNAISEPPPALSSARAIDPPKDQRANIVGNHLCYS
SPLHLQHRGRADSLKMESRLESGLAARSSSCSGTSSKLPLQKQLQSVVAAASSSGSSTSN
VAVTQTPRAREMSSSTGALPRINGGLSEGVEGPDAIVVVLRRDKNSGPPHIRPPSYVLAL
NDNQGGVTRRTPPLVKAGSADGAMCRTSSDGFKETHLRRLGDARLKSGSNDLDGSLDSIP
FIDEPSSPSTDQDSTHVPACAIICGTPVIATIPPSPSSLSPLIRRHLSHDQDSLRLTVAE
SDSGTKTERSKSYDEGLDNYRGEGIGRSLIPGLKSLRKAGDRSSEDSGSRRDSSSDVFCD
ATKEGLLHFKQLNTEKSKRVGGGMRPWKQMYAVLRGRYLCLYKDKKEGQAHANCQAVDEP
LPISIKACLIDISYSDTKRKNVLRLTTSDCEYLFQAEDREDMLAWIRVIQENGNMDEENS
VFTSHDLISRKIKEYNTLMSPTGGKTEASPKPSRQSLSIRHTLLGGKGDNKATSPPTAKT
EQERKNVHKDDTSPPKDKGTWRKSIPGLMRKPFERKPSPGVTFGVRLDDCPPAQTNKFVP
LIVEVCCKLVEERGLEYTGIYRVPGNNAAISNMQEELNNKGMSDIDVQDDKWRDLNVISS
LLKSFFRKLPEPLFTNDRYADFIDANRTEDPVERLKVLKRLLHELPDHHYETLKFLSAHL
KTVADNSEKNKMEPRNLAIVFGPTLVRTTEDNMTHMVTHMPDQYRIVEALIQNYNWFFTE
DGNGDPVTASRNDSAVESQPVPNIDHLLTNIGRTATSQGEVSDSPTSDSAKSKGSWGSGK
DRELLVSSIFAVASRKRKKSKEKPQPSSSDDDLDAAFAKKEIPGQKPNHHGLPAAAQGLN
AKTPARADERKENGRPAEVTPKAKREHRNSSFLKDKTPPSPNVSVHQTQARCSLSDPLSH
LDENTSDLGTMSSGASAPKSRPKKWSGTSPDLAAGACVGPAAGPGASAGAEVSSITSDYS
TTSSITFLTGAESSALSPELQGGEEADDERSELISEGRPMETDSESDFPVFAPGGGSGQS
TPRPDPSLDRTRPPEGGATPEPEARRLFPTHRMIECDTLSRRGSLRQQTDSESSAEGAAG
STERGGGKAESSTRLSRVLEVMKKGRSTSSLSSSSRSESERCEPAWHLKITERLKLRLRS
SADDMFTQRNRAPEARGKKKNIRRRHTMAGQRDFAELAVINDWREQRRAWDQTAELSALD
RLKPRCSSQDFSIRDWITREXGARGPGASDEVAPRAVAEDVHPEAGDVAPDRPSPSASPG
AAGEHVNGGGLQGKHRAALGADAHPHKLSGAQVVRSRFYQYL
NT seq
5889 nt
NT seq
+upstream
nt +downstream
nt
atggctcatctcaaagttctcgactgcatgatcaacaacaactggagtctgatctgcgac
ctgtactgcgcctggagcgaccaggccaagcagaaggatgggcgcgatcagagcgaggcg
tcggccgtggcctccctcgggcccgacgaggagcccttctcctggccgggacccaaaacg
ctccgcctgcggcgcacctcgcagggcttcggcttcacgctgcggcacttcatcgtctac
ccgccggagagcgccgtccacaactccctgaaggtgacgcccagaggatttggatacagc
gatgaagacaacggcagccgagggcgacagcggaaccgtctggagccaatggacaccatt
ttcgtcaagcaagtgaaggagggaggccccgcccacggagctggactctgtacaggggac
cggatagtcaaggtgaacggcgagagcatcattggaaaaacctactcgcaagttatagct
ttgatccagaacagcgatgcctcactggaactgtgtgtgatgccaaaggatgaggacatt
ttgcagctgttttccagggacatcactgctctggcgtattcccaggatgcatatctcaaa
ggaaatgatgcttacagcggaaatgcccagaacatccccgagccccctcccatatgctac
cctcggatagaagtcaagtccgcggccatggctcagacatcggagcccgccgcagtcacc
gagagccccccggggccggctcaaggaccggcaaggagagggggcgccgcggaaaagagc
cccgccgcgcccccgcaggggtcgaagtcccagacggcggtttgtgtctgcagcgagagc
gtgaggacggcggcgatgcctcctgatccagttgaccgggggtcccgggtggcccgggcc
ggacccagccacaggacagaggaaaaccggcacagccactcggcagaatcctcggccgcc
cccaggccgcttgttccctcggcacccgggggggcacaggtgcggtacccctcgtcccgc
cccgcagacagcccggcctgctcccctccagccagacccggcgctccctgtccggactta
ttgtctccagccgtacgggccactgccgcctcgccggacaccttctcctccgccgcctcg
cccggcggcaaccactactccccctctcccacaaccccctccacctcgccgcaccagaac
atcgactggaaaaactacaccacctacaaggactacatagacaccaagaggctgcacacg
tacggttgccgcaccatccaggagcgcctggacagcttgcgcgcggcggccaactccacc
tccgcctacgcccagcaacgcacgccgccggcccccagcacccctccgcgaggggcgccg
ggctctcaggtgagatggagaagcacctcgattgaacgcggggtggatccgagcagcgag
ggcgccgcagggacttcgttgcgtagcgtctcccaagagaggctcggcggtggaggcggg
agggcgccgccaggcgtaccctggcctcggagtgcctccgaggacgctctgcctttctcc
agccccgccggagtgccagaaccccgggcgcggtcttgtgactacctggggcagcggccg
ggagaaccggcgggctcggcggcgtttggagacagggcggtgctggaggaccggatgatg
ctgtgtcgcggggaggaagccagagccagcaggcagggggcgggccccagagccatgccc
cacctgaacaggagtctcaccgggcgagaaggtgggttgtcgaactccgctcctgtgttt
accaaattcacgacggatatcgcgccaacgccgaggacagacggggtcgtaatgagacca
tcgcgcctgtctgttaaaaacgccatctcagaacctccacctgccttatcgtccgcaaga
gccatagaccctcccaaagaccaaagagccaacatcgtgggcaaccacctgtgctactcg
tcgcctctgcacctgcagcacagaggccgggcggacagtctgaaaatggagagcaggttg
gagtccgggttggcggccaggtcctcctcttgctccggtacctcctctaaactgcctttg
cagaaacaactacaaagtgtagttgctgctgcctcttcctctggttcctccacctctaac
gtcgctgtcacccaaacgcccagggccagagaaatgtccagttccaccggcgccctcccg
cggattaacggcggcctgtcggaaggcgtagaagggccggacgcgatagtcgtcgtccta
agaagggacaaaaactccggacccccccacatccgccctccgtcctatgtgctggctctt
aatgacaaccagggaggagtgactcgcaggaccccgccactggtgaaggcgggctctgcg
gatggagccatgtgcaggacctcgagtgacggcttcaaggagacgcatctccggcggctc
ggagacgctcgactgaagtccggctccaacgacctggacggctcgctggattccatcccc
ttcatagacgaaccgtccagtcccagtaccgaccaggacagcacacacgtccccgcctgc
gccatcatctgcgggacgcccgtcatcgccaccatcccgccgagccccagctctctgtcg
cctctcattcgacgccacctgtcacatgaccaagattccctccgtctcacggtcgccgag
tccgattccggcacaaaaacggagcggtccaagtcgtatgacgaaggcctggataactac
cggggagaaggcataggcaggtctttaatacctggtctcaagagtctgaggaaggcgggg
gacaggtcatctgaagattcggggtccaggagggattcttcgtccgacgtcttctgcgac
gccaccaaggagggtttgcttcacttcaagcagctgaatacggagaagagcaagcgcgtg
ggaggaggaatgcgcccgtggaaacagatgtacgccgtgctgagaggccgctacctttgc
ctgtacaaagacaaaaaggaaggacaggctcacgccaactgccaagcggtggacgagccc
ctgcccatcagcatcaaggcgtgtctcatcgacatctcgtacagcgacaccaagcggaag
aacgtgctgcggctgaccacgtcggactgcgagtacctcttccaggccgaggaccgggag
gacatgctggcctggatccgggtcatacaggagaacggcaacatggacgaggagaattct
gtcttcaccagccatgacctcatcagcaggaagatcaaggagtacaacaccctgatgagt
ccgacaggcggcaagacggaggcgtcgcccaaaccctcccgccagtcgctgagcatcagg
cacacgctgctgggaggcaaaggggacaacaaagccaccagtcctcccacagccaaaacg
gagcaggagaggaagaacgtgcacaaagacgacaccagcccccccaaggacaaagggaca
tggaggaagagcatcccggggctgatgaggaaacccttcgagaggaagccgtcccccgga
gtcacgttcggagtgaggctggacgactgtccccctgcacagaccaacaagtttgtgcct
ctgattgtggaggtgtgctgtaagctggtggaggagagggggttggagtacacgggcatc
tacagagtccccgggaacaacgcggccatctccaacatgcaggaggagctcaataacaag
ggcatgagcgatatcgacgtccaggacgacaaatggagggacctgaacgtgatcagcagt
ttactcaagtccttcttccgcaaacttccagagccgttgttcacgaatgatcggtacgca
gacttcatcgacgccaacaggacagaggaccccgtggagaggctcaaagtgctcaagagg
ctgcttcacgagttgcccgatcatcactacgagaccctcaagttcctctcggctcatctg
aaaacggtggcggacaactcggagaagaacaagatggagccgaggaacctggccatcgtg
ttcggtcccactctggtgcggaccaccgaggacaacatgacccacatggtgacacacatg
ccggaccagtaccgcatcgtggaggccctcattcagaactataactggtttttcactgaa
gatggaaatggagatccagtgaccgcgtcgcgtaacgacagcgcggtggagtctcagccc
gtgcccaacatcgaccacctgctcaccaacatcgggcgcacggccacgtcgcagggtgaa
gtatcagattcaccgactagcgactcggccaaatcgaagggttcctggggctcggggaag
gaccgggagctcttggtctcctccatctttgctgtagccagtcgcaaaagaaagaagtca
aaggagaagccgcagcccagcagctcagacgatgacctggacgccgcgttcgccaaaaag
gaaatccccggccagaagccgaaccaccacggcctcccggccgcggcgcagggcctcaac
gccaagacgccggcccgcgcagacgagaggaaagagaacgggagacctgcggaggtcacc
cccaaagccaagagagagcacaggaactcctccttcctgaaggacaagactccgccctcc
ccaaatgtctctgtccaccaaactcaggcgaggtgctccttgtccgaccccctgtcccac
ctcgatgagaacacctctgacctcgggaccatgagctccggggcgtccgcgcccaagtcc
agacccaaaaagtggagcggaacgtcccccgacctcgcggcgggcgcctgtgtcgggccc
gcggccggtccgggggcgtccgccggagcggaggtgagctccatcacctcggactactcc
accacgtcctccatcacgttcttgaccggcgcggagtccagcgcgctcagtccggagctg
cagggcggggaggaggcggacgacgagcgcagcgagctcatcagcgagggccgacccatg
gagacggacagcgagagcgacttcccggtgttcgcccccggcggaggcagcggccagtcc
acgccgcgcccggacccgagcctggaccggacccggccgcccgagggcggcgccacgccc
gagccggaagcgcggcgccttttcccgacccacaggatgatcgagtgcgacacgctctcc
aggcgggggtccctcagacagcagaccgacagcgagtcgtcggcggagggcgccgctggg
agcacggagcgcggcgggggcaaggccgagtcctccacgcggctctcccgggtcctggag
gtgatgaagaaaggccggtccaccagcagcctcagctcgtcctcccgcagcgagtcggag
cgctgcgagcccgcctggcacctcaagatcacggagcggctcaagctccgcttgcgctcc
tccgccgacgacatgttcacgcagaggaaccgagcgccggaggcccgcgggaagaagaag
aacatccgccgcaggcacaccatggccgggcagagggacttcgccgagctggccgtcatc
aacgactggagggagcaaaggcgggcgtgggaccagacggccgagctgtccgctctagac
cgcctcaagccccggtgttcctctcaggacttctccatccgggactggatcaccagagag
nncggtgcccgaggccccggtgccagcgacgaggtcgcacctcgtgccgttgccgaggac
gttcacccggaggccggggacgtggctcccgaccggccttctccctccgcgtccccgggc
gcagccggggagcacgtcaacggcggcgggctgcagggcaaacacagagcggccctcggg
gccgacgctcacccgcacaaactgagcggggcacaggtggtccgctcgcggttctaccag
tacctgtga
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