Gasterosteus aculeatus (three-spined stickleback): 120831920
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Entry
120831920 CDS
T07457
Symbol
sec16a
Name
(RefSeq) protein transport protein Sec16A isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gat04131
]
120831920 (sec16a)
Membrane trafficking [BR:
gat04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
120831920 (sec16a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec16_C
Sec16
Motif
Other DBs
NCBI-GeneID:
120831920
NCBI-ProteinID:
XP_040053767
LinkDB
All DBs
Position
XIV:3525533..3540249
Genome browser
AA seq
2390 aa
AA seq
DB search
MQRPPATGPPGASGPPPPGPDMYRRTRPHKHATAAAATAQPITNPFAFVRAPPPMAAGPS
LAAGPSLAAGGLPTVPNSNPPPMQAPPNTMYSQASSGLPPQLQTRGDVPAPHSGPPPSSL
PGVTLFNPHSAASPGVYPAPSPVGYASSHTEQGYFNSTEQTPSMTTEPPSLAPVPGQTPF
NQEFQRQPAPQPMMFQPVPPTTSYSQWPPDHGSRPPSVQNYFQPTSDPPPQAFNLPPQTQ
MYPSHTPSPHHNTPTPPTHAGRPQVQAPLPPQNPVNPPSSQWPDPNAPQQHNSHFQNPSY
FSQTSAPQDSWFNTPPLDSGYHQMGTGPAHAHPRPYSVGSQQASNTGPGPSSAPAPVQVP
YSQESGSLSMFFKDNDVENEETLAGDRNKAVNGLPGSFQPQSNPQAHSGQADVPLDYQGP
PPADNSHLPYMSDGNPQASTHMSPDPHYDHVENLECVPNQEVLPSDIHGIPAAAGAAPGA
AHVDQYETGPNLETPDSIQRPIRSASVSSNYSNMSHGSGSGTRRQQGVVGTFIQQESLRL
TDDANLSAATGGYFEQIDTSPAVDVGVPHSSLEQMWPTTPSPPKPTGIFQASANSSFEPV
RSHGVGVRPAEVDTANVVAEMGADAIPGNLEQPPDNMENIYGSAGGVPNLPHPVVHSLSR
PSSRAFGGSRPCESPATTLWAQHDPGSLAASIVLAPAAPTVLAPLREPSTDVIQPPEDGP
LDLQPSQRIQPSSQQHSENLENPPEVSEAEPTDPQGILGYASLLVSDSLDQPVLIAPPVS
NYSVISPSTPAQASSQSSPRETTPPVRIVPQEQPPMTSNHNPLFAPGFMSFNSSASNQSP
LNLTRDNTQAATQDNTTPPVRPPLSRGQSLAGDGPSSPQVNPQASPATAPVSNHNQPSNY
ELLDFSMHQSQAQNPTSGHPLSLHESPQSSNGFYLQVTKDAQQGVRAQGNVPVQMPASSS
TPQVPPAPSQAAANSQPPPAEHPRTSDPRAAPQGQNDAPPVSGSGGQPSRDQYPPPAQGP
PTGRAPPSAVAAAAAYPPWPAGPVPPGASHPAAAEPPRPPSSAGSQQGYGPPPPVPGQMY
GGYYGNYGEYPDSRAPYPPGQYPPPPGQYPPPPGPYPPPPGDPRAQQYYQEGPYRGRVDP
WYGRYEGQIPQARDPNYQYREPQPERPSSRASQYSDRPSSRQGYPEDYQRANPSAYSEYY
ADYAKHYEYGGYNYGQYDPRYREYYDPAYWANYGDSYKARDNLYNQQAYPARKEGYEDQW
QYYPGYDASFDDDYRRRREPYADDFDRRSVHSEQSAHSVHSSQSHHSRRSSFSSRSQQSQ
VYTSQPDLVSAVYDTTSSTLAVDYSYAQYPNQPDATQNYSQYLYPSEYTADSTWIAPDQP
PPRPATPEKFTMPHRCARFGPGGHLVQVLPNLPSAGQPALVDIHNLETILQDTPDQAELR
SFPGPLVKEETHKVDVIKFSQNKALECSRDNNLLDRDSARLLWEFIVLLCRQNGTVVGTD
IADLLLKEHRSVWLPGKSPNEANLIDFNNEPLARAEEGPGAGPLSLLSDTFMTVPENLGK
ETERFRELLLFGRKKDALEAAMKGGLWGHALLLASKMDNRTHARVMTRFANSLPINDPLQ
TVYQLMSGRMPASATCCGEEKWGDWRPHLAMVLSNLTHTLDLDTRTITTMGDTLVSKGLV
DAAHFCYLMAQVGLGVFTKKSTKMVLIGSNHSLSFHQCATNEAIQRTEAYEYAQSLGSQS
CSLPNFQVFKLIYACRLAEAGLSAQAFHYCEVISRNVLMQPSYYSPVFISQIIQMSEKLR
FFDPQLKEKPEQELFNEPEWLIHLRQLDGQMRTGVITYNEDRATPTQFDCSSPSSDLDQL
SPAEPYSVPHANHEVDGPAPDNQLMSSLLPGAQPQGVQLMPPAPTSILQDGMAPPQPLPT
GEVPQFYPVPPSGPPGHMALSGYPPQDPGFAPPPFQPQPEQTEMYPGAHQQPLHAGHTSP
YAHPAQLPHSPVQMNPPPPQMHHHMPNHVNQHMPPSPGHMAPAQQMSHPPPEMHAAQAVS
SSPRRSSFTPQMDFYDHMAHVQAPGRRSRTTSQSSMHMASGRRSRTTSESSTHSGGRERS
NSAVKQASPPPPSIPEQPRAEESKRVKKDSPKKGGGRGGGGGGGGGGWLNWLYRKGKNEA
HLPDDKNKSIVWDENKQKWVDLNEPEEESKPLPPPPPGFPKMPHMPGPGGPGGPPSGGPP
VNMFSRRAGTKSRYVDVLNPGRIAKPGGTAPPPAEIFAPLAPMSMPANLFVPSSAPGDQQ
PLEGSEGANQEQNSPNAIAATQMFNPTLLPPAPEGPAMPDGSRSGELSRSSSMSSLSREV
SQHLNQSPAQETAPAGGVTFYNPAAQFAQPSGGGARSGRLGGPRQYPVLK
NT seq
7173 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgtcctcctgcgaccggacctccaggagcctcgggcccacctccgcccgggccc
gatatgtaccgcaggaccaggcctcacaagcatgcgacggcagcagcagccactgcacaa
cccatcacaaacccttttgcttttgttagagcgcctccccctatggctgcaggtccgtct
ttggctgcaggtccgtctttggctgcaggtggtctcccaacagtacccaacagcaatccc
ccaccaatgcaagccccacctaacaccatgtactctcaggccagctcagggctgcctcca
caactgcagacgcggggggatgtcccagctcctcattctggtccgccaccctcctctcta
ccaggggtgacgctgttcaaccctcacagtgcagcatcccccggtgtctacccagcaccc
agtcctgtaggatatgcatcgtcgcatactgaacagggttattttaattcaacagaacag
acgccatctatgaccacagagccgccgtctttggccccagtaccgggccagacccctttc
aaccaggaatttcaacgacagcctgctcctcagcccatgatgttccagcccgttcccccc
accacctcctattctcagtggccccctgatcatggaagtcgccctccgtctgttcagaat
tatttccagcctactagtgaccctccgccacaggctttcaatttacccccacagacccag
atgtacccctcccacaccccatcgccccatcacaacacccccacccctccaacacacgcc
ggacgtccccaggttcaagctcctcttcctccccaaaaccctgtaaatcccccaagttca
cagtggcccgacccaaatgcacctcagcagcataattcccacttccaaaatccaagctat
ttcagtcagacatctgccccccaggactcatggttcaatacacctccactggactcaggc
taccaccaaatggggaccggcccagcgcatgctcacccccggccttactctgttggatcg
caacaagcgtccaacactgggcctggacctagttctgcccctgccccagtccaagtcccg
tactctcaggagtctggttcactctcaatgttcttcaaagacaatgatgtggaaaacgag
gaaacactggccggagaccgaaacaaggcagtcaacggtctcccgggatcctttcagcct
cagagcaacccacaagcccatagtggccaagcagatgttcctttggattatcaaggacct
cctccagcagataattcccacctaccgtacatgagtgatggcaaccctcaggcaagcacc
catatgtctcctgatccccattacgaccatgtggagaatttggagtgtgtgccgaaccag
gaagtattacccagtgatatccatggcatccctgctgctgctggtgctgctcctggtgca
gcgcatgtcgaccagtatgaaaccggccctaacctggagactcctgattccatccaaaga
ccgattagatctgccagcgtgtcctccaactatagcaatatgagccatggaagtggaagc
ggcacccgaagacagcagggagtagtcggtacctttattcagcaggaaagcctgcgtctc
accgatgatgccaacctctctgctgccactggaggctactttgagcagatcgacacttct
ccagctgttgatgtgggcgtgccacacagctccctggagcagatgtggcccaccacacct
agcccccccaaaccaactggtatctttcaggccagtgcaaacagctcctttgaacctgta
cgctcccatggggttggggtgcgtccggccgaagttgatacggccaacgtggtcgcagaa
atgggtgccgatgctatccccggcaatctggagcagccgccggataacatggaaaatatt
tatggctcagcagggggtgttcctaatctgccacacccagtggttcactctctctctcga
ccttcatcccgtgcttttgggggcagtcggccctgcgagagccccgccacgaccctgtgg
gctcagcatgatcccggcagcctggccgccagcatcgtcctggcccccgcagccccaaca
gtactcgcccctttacgggagcccagtaccgatgtcatccaacctccagaggatggcccg
ctggacctgcaaccctctcagagaatccagccatcttcacagcagcactcggagaaccta
gagaacccaccagaggtgagtgaggcagagccgaccgaccctcaaggcatcctgggctac
gcttctctccttgtgtccgactcgctcgatcagccggtattgattgccccgccggtgtcc
aattacagtgtgatctcccccagtacccctgctcaagcatccagtcaaagtagcccaagg
gaaacaaccccccctgtaagaattgtcccacaggaacaacctccaatgacctccaatcac
aatccattgtttgcccctggatttatgagcttcaattcttctgcatctaaccagagtccg
ctcaatctgactcgagacaacacacaagcagcaacacaagacaacacaactccgccggtc
cgccctcctctctcaaggggccaatcgctggctggagacggcccctcttctccccaagtt
aatccacaggcttctcccgcaactgctcctgtctctaatcataatcagccgtcaaattat
gaactgcttgatttttctatgcaccaatcacaagcccagaacccaacgtctggccatcct
ttgtctctacacgagtcaccgcagtctagtaatggattttacctacaggtcaccaaagat
gctcagcagggggtaagagcacaagggaatgtccctgtccagatgccggcctcttcatct
accccacaggtaccaccagcaccctcccaagcagctgcaaacagccaacccccaccggcc
gaacatcccaggacatccgaccctcgggcggcgccgcagggacagaatgatgctcctcct
gtttcagggagtggaggacaaccctctagggaccagtatccacctccagcacaggggcct
cccacagggagggctcccccatccgctgttgctgctgctgctgcataccccccatggcct
gcaggaccagtacctccaggagcttcccacccagctgccgcagaaccacctcgaccgcct
tcctctgcaggcagccagcaaggctatggaccccctcctccagtgccagggcagatgtat
ggtggctattatggtaattatggagaatacccggatagcagggcaccatatccacctggc
cagtacccacctccgcctggccagtacccacctccgcctggcccgtatccacctccgcct
ggggatcctagagcacagcaatattatcaagagggtccatacaggggcagagtagatcct
tggtacggccgatatgaggggcagatcccacaggctcgcgatccaaactaccagtacaga
gagccccagcctgagcgccccagctccagagccagtcagtactctgacaggccctcatcc
aggcaaggatatcctgaagattaccagagagccaacccaagtgcctacagtgaatattat
gcagattacgccaaacactatgaatacggaggctacaactacggacagtatgacccccgg
tacagagaatactatgatcccgcctactgggcgaattatggtgacagctacaaagccaga
gacaatttgtacaatcaacaggcttatcctgccaggaaagagggctacgaggatcagtgg
cagtactaccccggctatgatgccagcttcgatgatgactaccggcgacgcagagagccg
tacgccgatgactttgaccggcgcagcgtccacagcgagcagtcggcgcacagtgtgcac
agctctcagagccaccacagcaggcggagcagcttcagctcgcgatcacaacagagccag
gtgtacacaagccagcctgacttggtgtcagcagtctatgacaccacatcatccacgctg
gctgtggactactcctatgcacagtaccccaaccagcctgatgccacccagaactacagc
cagtacctgtatccctcagagtacacggcagacagcacctggatcgcccccgatcagcct
cctccacgtcctgcaactccagagaagttcacgatgccccaccgttgtgcccgctttgga
cctgggggtcatctggttcaagttctgcccaacctcccctcagctggacagcctgctctc
gttgatatccacaatttggagaccatcctgcaagataccccggatcaggctgagctccga
tctttccctggaccgcttgttaaggaggagacccacaaggtggacgtgatcaagttctcc
cagaacaaagcgctggagtgttcccgtgacaacaacctcttggacagggactctgcccgc
ctgctctgggaattcatcgtgctgctctgcaggcagaacgggaccgtggtcggcacggac
atcgccgacctgctgctcaaggagcaccgctcagtgtggctgccgggcaaaagtccaaac
gaagccaacttgattgatttcaacaacgaaccgctggcacgagccgaggagggcccagga
gccgggccgctatccctcctatccgacaccttcatgaccgtcccagagaaccttggcaag
gaaaccgaacgcttccgggagctgctgctgtttggccgcaagaaggacgccctagaggcg
gctatgaaggggggtctctggggccacgccctgctgttggccagtaagatggacaaccgg
acccatgcacgtgtcatgacaaggtttgccaacagtttgcccatcaatgaccctcttcag
acagtgtaccagctcatgtctgggaggatgcctgcatcagccacctgctgcggggaggag
aagtggggggactggcgcccccacctggccatggtgctgtccaacctcacacacacgctg
gacctggacactcgcaccatcaccactatgggggacaccctcgtatccaaggggctggtt
gacgccgctcacttctgctacttgatggcccaggtcggtctgggagtcttcacgaagaag
agcaccaagatggttctgatcggctccaaccacagtttgtcctttcaccaatgtgcgacc
aatgaagctatccagaggactgaggcctacgagtatgctcagtctctgggctcgcagtcg
tgctcactacccaatttccaggtgttcaagttgatctatgcatgccgtctggccgaagcg
ggtctgagcgctcaggccttccactactgtgaagtcatttcacggaatgtcctcatgcag
ccttcctattactctcctgttttcataagccaaattatacagatgtcggaaaagctgcga
ttctttgatccacaactgaaggagaagccggagcaggagttgttcaatgagccggaatgg
ctgatccacctcaggcagctggatggacagatgaggacgggagtgatcacatacaacgaa
gaccgagcaactcctacacagttcgactgcagcagccccagctccgacctggaccagctg
agtccagcggaaccgtacagcgtgcctcatgctaatcatgaggtagacggccccgccccc
gacaaccaactgatgagctctttactgcccggggctcaaccgcagggagttcagctgatg
cccccagctcccacctctatcctccaagacgggatggcacctcctcagcccttgcccacc
ggtgaggtcccccagttctacccagtaccccccagtggacccccaggccacatggccctc
tcgggctaccctccacaggaccctggctttgccccgcctccctttcaaccccaaccggag
cagaccgagatgtacccaggagcccatcagcagcctcttcatgcgggccacacgtctccg
tatgcgcaccccgctcagctgccgcattcaccagtacagatgaaccccccgccgccccag
atgcaccatcacatgcccaatcacgtgaaccaacacatgcccccttcccccgggcacatg
gcgcctgcacagcagatgtcccaccccccgccggagatgcacgctgctcaggccgtatcc
tcctccccacgcaggagctccttcacaccacagatggacttctatgaccacatggctcac
gttcaggcccccggcaggaggtcacggacaacgtcacagtcttcgatgcatatggcttcg
gggcgccgctctcgcaccacctcagaatcttctactcactcgggcggcagggagcggagc
aactcggccgtcaagcaggcctctccgcctccgccctcgatccccgaacagccgcgcgca
gaagagtccaagagagtcaagaaagactccccgaaaaagggtggtggtaggggtggagga
ggaggaggaggtggtggtggttggctaaactggctctataggaagggaaagaacgaggct
cacttgcccgatgacaaaaacaaatctattgtctgggatgaaaataagcagaaatgggtg
gacttgaacgagcctgaagaggagagcaagccccttccacctcctccccccggctttccc
aagatgccacacatgcctggtcccggaggacctggcggacctccgagtggtggccctcct
gtcaacatgttctccaggagagcgggcacaaagagccggtatgtggacgttctgaacccc
ggcaggattgctaagccgggcggaacggcgcctcctcctgcggagatcttcgcccctttg
gcgccaatgtccatgcccgctaacttgtttgtgcctagttcggctcctggcgatcaacaa
cctctggaaggcagcgaaggagcaaatcaggagcagaattcaccgaacgccatcgctgct
acacagatgttcaacccaacgttgttaccgcccgccccagaaggtcctgccatgcctgat
ggttcacgatccggggagctctcgcgttctagctcaatgagttctttatcacgagaagtg
agtcagcatttaaaccagagtcccgcccaggaaacggcacccgctggaggcgtcaccttt
tataaccctgcagcacagtttgcacagccatcgggaggcggagcccgctctgggcgtttg
gggggtccgcggcagtacccggtgttgaaataa
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integrated database retrieval system
