Gemmatimonas aurantiaca: GAU_1953
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Entry
GAU_1953 CDS
T00878
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
gau
Gemmatimonas aurantiaca
Pathway
gau03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GAU_1953 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gau03400
]
GAU_1953 (uvrB)
DNA repair and recombination proteins [BR:
gau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GAU_1953 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GAU_1953 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
NACHT
UB2H
HEM4
Motif
Other DBs
NCBI-ProteinID:
BAH38995
NITE:
GAU_1953
UniProt:
C1A4H0
LinkDB
All DBs
Position
complement(2280508..2282610)
Genome browser
AA seq
700 aa
AA seq
DB search
MTAPFRLHAPFAPAGDQPRAITELSSGLHRGDRIQTLLGVTGSGKTMTMANVIADWGRPT
LVLSHNKTLAAQLYGELKSFFPNNAVEYFISYYDYYQPEAYVPSSDTYIEKDASINEDID
RLRLRATSSLMERDDVVIVSTVSAIYGLGDPVQYRERMVALSRGQQIARDDILRALVGIQ
YLRNDVAFERGTFRVRGDTVEILPAYEEQAVRIELWGDEIERISKIDPVTGETIAALERM
AIYPAKHFITNRPTIERASMAIRDELATRLAELRMAGKLLEAQRLEQRTQFDLEMLMEIG
TCAGIENYSRHISGREAGERPACLLDYFPDDYLVVVDESHVTLPQIRAMYNGDRARKLTL
VDYGFRLPSALDNRPLVFDEFMSLVPRLVNVSATPGELELQLSEGVVVEQVIRPTGLLDP
VLEVRPVKGQVDDLLHEIRARERRGERVLVTTLTKRMSEDLTDYLQQMGVRVRYMHSDID
AIERMEIVRGLRLGEFDVLVGINLLREGLDMPEVSLVAILDADQEGFLRSDRSLIQTIGR
AARNLHGMAILYGDRITGSMQRAIDETTRRRTIQREHNEAHGIVPRGVTKSVDEVRFITR
VADARVEREGEAPAPRRLASESAPRSREELETLVGELEIAMREAAVALDFEAAARLRDQL
FEVRTALGQAPSEARGNAQAPKRPPGSAPQRRAGGGRRGR
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgactgcgccgtttcgactgcatgctcccttcgcccccgctggcgaccagccgcgagcg
atcaccgaactctcctccggcctgcatcgtggcgaccggattcagacgctgctcggcgtc
acgggttcgggcaagacaatgaccatggcgaatgtcatcgccgactgggggcgtcccacg
ctcgtcctgtcgcacaacaagacgctggccgcgcagttgtacggggaactcaagtcgttt
ttcccgaacaacgccgttgagtacttcatctcgtactacgactactatcagcccgaggcg
tatgtcccctcgagcgatacgtacatcgagaaggacgccagcatcaacgaggacatcgac
cggctgcgactgcgcgcgacctcgtcattgatggagcgcgacgatgtcgtgatcgtttcc
acggtgtcggccatctacggtctcggtgatccggtgcagtaccgcgagcgcatggtggcg
ctgtcgcgcggacagcagatcgcccgggacgacatcctgcgggccctggtcggcattcag
tatctgcgcaacgacgtggctttcgagcggggcacgtttcgggtgcgtggagacacggtg
gagatcctgccggcctacgaggagcaggcagtgcgtatcgagttgtggggcgatgagatc
gagcgcatctcgaaaatcgatccggtcaccggtgagacgattgcggccctggagcgcatg
gccatctacccggccaaacacttcatcacgaaccgtcccaccatcgagcgcgcgtcgatg
gccattcgcgacgagctggcgacacggctggccgaactgcgcatggccggcaagttgctg
gaggcgcagcgtctcgagcagcgcacgcaattcgatctcgagatgctgatggaaatcggc
acctgtgccggcatcgagaactattcgcgacatatcagtggacgcgaagcgggtgaacgc
ccggcctgtctgctcgactatttccccgatgactatctcgtggtggtcgacgagtcccac
gtcacgttgccgcagatccgcgccatgtacaacggcgatcgggcacgaaagctcacgctg
gtggactatggatttcggttgcccagcgcgttggacaaccgaccgttggtgttcgacgaa
ttcatgtcgttggtgccgcgcctcgtgaacgtatcggccactccgggcgaactggaattg
cagttgtccgaaggcgtggtggtggagcaggtgattcgacccacggggctgctcgatccg
gtgctcgaagtgcgcccggtgaaggggcaggtggacgatctgttgcacgagatccgggca
cgggagcgacgcggcgagcgggtgctggtcaccacgctcaccaagcgcatgtcggaagat
ctcaccgactacctgcagcagatgggagtgcgggtgcgctacatgcactccgatatcgac
gccatcgagcgcatggaaatcgtgcgcggcctgcggctcggggaattcgatgtgttggtg
ggtatcaacctgctgcgcgaagggctcgacatgcccgaggtgtcgctggtggcgattctc
gacgccgaccaggaagggtttttgcgcagtgatcgttcactcattcagaccattgggcgt
gccgcgcgcaatctgcatggcatggccattctgtacggagatcggatcaccggttcgatg
caacgcgccatcgacgaaaccacgcggcggcgcacgattcagcgggagcacaacgaggcg
catggcatcgtgcctcgtggtgtcaccaagagcgttgatgaagtccgtttcatcacgcgt
gtggcggatgcccgtgtggagcgtgagggcgaagcaccggcgcctcgtcgtctggcgagc
gaatcggcaccacgcagccgtgaagagttggagacactggtcggcgaactcgagatcgcc
atgcgggaagcggcggtggcgctggacttcgaggcggcggcccgtctgcgtgaccaactg
ttcgaagtgcgtactgcactgggccaggccccgtccgaagcacgtggcaacgcacaggct
cccaagcggccgcccggcagtgcgccccagcgacgcgctgggggaggacgtcgtggtcgc
tga
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integrated database retrieval system
