Gemmatirosa kalamazoonensis: J421_5175
Help
Entry
J421_5175 CDS
T03025
Name
(GenBank) Periplasmic binding protein domain protein
KO
K10559
rhamnose transport system substrate-binding protein
K10561
rhamnose transport system permease protein
Organism
gba
Gemmatirosa kalamazoonensis
Pathway
gba02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gba00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
J421_5175
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gba02000
]
J421_5175
Transporters [BR:
gba02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Rhamnose transporter
J421_5175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
BPD_transp_2
Peripla_BP_1
PTH2
Bmp
GDPD
Motif
Other DBs
NCBI-ProteinID:
AHG92710
UniProt:
W0RQY5
LinkDB
All DBs
Position
p1:complement(684073..686199)
Genome browser
AA seq
708 aa
AA seq
DB search
MSATSAARVPLSAEPPLETEAPLRERLFPNGEWVLLAVLALECVVFGVTGHNFTSTANAF
EITRLAVEIGLLALALTPIIVTGGIDLSVGSMMGLSAVALGALWRDAGVPLPLAAALTLL
LGTLGGALNAAMITRLGFPPLIVTLGTFSLFRGAAEGLTRGIANYSGFPSSFLFLGQGYL
GGVVPAQLAILVVAALACWWWLQRTAYGRTLYAIGYSADGARYAGVPVRRRLALAYVLSG
AASSLAAVVYVAHLGQAKSDAGTGYELTAITAVVLGGASIFGGRGTVLGTLLGLFAIVVL
QNGLRLSGQPAELAGILTGVLLVGTILLDRLARRPKRATAAAATATLSPTADTDVRNSQV
AALSAVILAGALIVAGSNWYLVRSLRTELHGRAVPDASAAAPVATPTEHAVVALMPKAKG
DPYFISARAGAEAEAKRLGVDLLWDGPTDLDPAKQNEVVEAWITRGVNAIAVSVENKEAI
STVLRKARQRGIKVVTWDADAEPDARDFFVNQATPEGIGNTLTDETARIMGGRGEFAIIT
ASLSAANQNEWIKYIRARLAAKYPDLKLVAIQPSDGDRDRAFAETQNVLKVHPNVKVVMA
IAAPAVPGAAEAVKQSGRTDVKVTGLSLPNMCRPYIKSGVIESIVLWNTGDLGALAVATA
QAVAAGRLKRGDTSFDAGPLGTFAVAGDQVLLGQPFVFNKSNIDRFNF
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccacttcggccgcgcgcgtcccgctgtcggctgagccgccgctcgagacggag
gcgccgctccgcgagcggctcttcccgaacggcgagtgggtgctcctcgccgtgctcgcg
ctggagtgcgtcgtgttcggcgtcacggggcacaacttcacgagcacggcgaacgcgttc
gagatcacgcggctcgcggtggagatcgggctgctcgcgctcgcgctcacgccgatcatc
gtcaccggcggcatcgacctctcggtcggctccatgatgggcctctccgccgtggcgctc
ggcgcgctgtggcgcgacgcgggcgtgccgctgccgctggccgccgcgctcacgctgctg
ttaggcaccctcggcggcgcgctgaacgcggcgatgatcacgcggctcggcttcccgccg
ctcatcgtgacgctcggcacgttctcgctgttccgcggcgcggcggaagggctcacccgc
gggatcgcgaactactcggggttcccgtcgtcgttcctgtttctcggccagggctacctc
ggcggcgtggtgccggcgcagctcgcgatcctcgtcgtcgcggcgctcgcgtgctggtgg
tggctgcagcgcaccgcgtacgggcgcacgctctacgcgatcggctactcggcggacggc
gcgcgctacgcgggcgtacccgtgcgccgccgcctcgcgctcgcgtacgtgctctccggc
gcggcatcgagcctcgccgcggtggtgtacgtcgcgcacctcgggcaggcgaagtcggac
gccggcaccggctacgagctgacggcgatcaccgccgtcgtgctgggcggcgcgtcgatc
ttcggcggccgcggcacggtgctcggcacgctgctcgggctgttcgccatcgtggtgctg
cagaacgggctgcggctgagcgggcagcccgcggagctcgcgggcatcctcaccggcgtg
ctgctcgtcggcacgatcctgctcgaccgcctggcgcgacgcccgaagcgcgcgaccgcc
gctgctgctaccgcgacactctctcccaccgccgacaccgacgtgcggaactcacaggtc
gccgcgctgagcgcggtcatcctcgccggagcgctgatcgtcgccggcagcaactggtac
ctcgtgcgctcgctgcgcaccgagctgcacggccgcgcggtgccggacgcctcggccgcc
gcgccggtagcgacgcccaccgagcacgccgtcgtcgcgctcatgccgaaggcgaagggc
gacccgtacttcatcagcgcgcgcgccggcgccgaggcggaggcgaagcggctcggcgtc
gacctgctgtgggatgggccgacggatctcgatcccgcgaagcagaacgaggtcgtggag
gcgtggatcacgcgcggcgtgaacgcgatcgccgtcagcgtggagaacaaggaggccatc
tccacggtgctgcggaaggcgcgccagcgcggcatcaaggtggtgacgtgggacgccgac
gccgagccggacgcgcgcgacttcttcgtgaaccaggcgacgccggaagggatcggcaac
acgctcaccgacgagacggcgcgcatcatgggcggccgcggcgagttcgcgatcatcacc
gcgagcctcagcgccgcgaaccagaacgagtggatcaagtacatccgtgcgcgcctcgcc
gcgaagtaccccgacctgaagctcgtcgccatccagccgagcgacggggaccgcgaccgc
gcgttcgccgagacgcagaacgtgctgaaggtgcatccgaacgtgaaggtggtgatggcg
atcgccgcgcccgcggtgcccggcgccgcggaagcggtgaagcagtcggggcgcaccgat
gtgaaggtcacgggtctctcgctgccgaacatgtgccggccgtacatcaagtcgggcgtg
atcgagagtatcgtgctgtggaacacgggcgacctcggcgcgctcgcggtggccacggcg
caggcggtggccgccgggcggctcaagcgcggcgacacgtcgttcgacgccggaccgtta
ggcaccttcgccgtcgccggcgaccaggtgctgctggggcagccgttcgtgttcaacaag
agcaacatcgaccggttcaatttttga
DBGET
integrated database retrieval system
