KEGG   Gemmatirosa kalamazoonensis: J421_5988
Entry
J421_5988         CDS       T03025                                 
Name
(GenBank) DNA repair protein
  KO
K10979  DNA end-binding protein Ku
Organism
gba  Gemmatirosa kalamazoonensis
Pathway
gba03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:gba00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    J421_5988
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gba03400]
    J421_5988
DNA repair and recombination proteins [BR:gba03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     J421_5988
SSDB
Motif
Pfam: Ku
Other DBs
NCBI-ProteinID: AHG93523
UniProt: W0RVB1
LinkDB
Position
p2:528823..529632
AA seq 269 aa
MPARAIGTATISFGLVSVPVNLYSSSESRTSVSFNMLHKNCGSRLKQQYVCPKDNNEVVG
RDQTVKGYEFAKEQYVVFTTEELKAIEEKATGAIDVVEFVPLAQVDREYLEKVYYLGPDK
GGERAYRLLAAALHDTGRAALGQYAARGQQHLVLLRPLNGVLVMEQLHYADEVRSITEVP
IPDGEVKAQELALAKMLIAQGSNDAFEPQKYKDTVRERVMDAIQRKIEGQDITSDVTPDG
GGKIIDLMEALKASLAAPGEMKSQELRAS
NT seq 810 nt   +upstreamnt  +downstreamnt
atgcccgctcgcgccatcggcaccgctaccatctccttcgggctcgtttcggttccggtc
aatctctactcgtcgagcgagtcgcgcacgagcgtgtcgttcaacatgctgcacaagaac
tgtggctcgcgactgaagcagcagtacgtctgcccgaaggacaacaacgaagtggtggga
cgcgaccagaccgtcaaggggtacgagttcgcgaaggagcagtacgtggtgttcaccacc
gaggagctgaaggcgatcgaggagaaggcgaccggcgcgatcgacgtcgtggagttcgtg
ccgctcgcgcaagtcgaccgcgagtatctcgagaaggtctactacctcgggcccgacaag
ggcggcgagcgcgcgtaccgactgctcgcggcggcgctgcacgacacgggacgcgcggcg
ctcggccagtacgcggcgcgcggtcagcagcatctcgtgctcctgcggccgctgaacggc
gtgctcgtgatggagcagctccactacgccgacgaggtgcggtcgatcaccgaggtgccg
attcccgacggcgaggtgaaggcgcaggagctcgcgctcgcgaagatgctcatcgcgcag
ggatcgaacgacgcgttcgagccgcagaaatacaaggacacggtgcgcgagcgcgtgatg
gacgcgatccagcgcaagatcgagggccaggacatcacgtccgacgtgacgcccgacggc
ggcggcaagatcatcgacctcatggaagcgctgaaggcgagcctcgccgcgcccggcgag
atgaagtcgcaggagctgcgcgcgtcgtga

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