Gemmatirosa kalamazoonensis: J421_5988
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Entry
J421_5988 CDS
T03025
Name
(GenBank) DNA repair protein
KO
K10979
DNA end-binding protein Ku
Organism
gba
Gemmatirosa kalamazoonensis
Pathway
gba03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
gba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
J421_5988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gba03400
]
J421_5988
DNA repair and recombination proteins [BR:
gba03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
J421_5988
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
AHG93523
UniProt:
W0RVB1
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All DBs
Position
p2:528823..529632
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AA seq
269 aa
AA seq
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MPARAIGTATISFGLVSVPVNLYSSSESRTSVSFNMLHKNCGSRLKQQYVCPKDNNEVVG
RDQTVKGYEFAKEQYVVFTTEELKAIEEKATGAIDVVEFVPLAQVDREYLEKVYYLGPDK
GGERAYRLLAAALHDTGRAALGQYAARGQQHLVLLRPLNGVLVMEQLHYADEVRSITEVP
IPDGEVKAQELALAKMLIAQGSNDAFEPQKYKDTVRERVMDAIQRKIEGQDITSDVTPDG
GGKIIDLMEALKASLAAPGEMKSQELRAS
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcccgctcgcgccatcggcaccgctaccatctccttcgggctcgtttcggttccggtc
aatctctactcgtcgagcgagtcgcgcacgagcgtgtcgttcaacatgctgcacaagaac
tgtggctcgcgactgaagcagcagtacgtctgcccgaaggacaacaacgaagtggtggga
cgcgaccagaccgtcaaggggtacgagttcgcgaaggagcagtacgtggtgttcaccacc
gaggagctgaaggcgatcgaggagaaggcgaccggcgcgatcgacgtcgtggagttcgtg
ccgctcgcgcaagtcgaccgcgagtatctcgagaaggtctactacctcgggcccgacaag
ggcggcgagcgcgcgtaccgactgctcgcggcggcgctgcacgacacgggacgcgcggcg
ctcggccagtacgcggcgcgcggtcagcagcatctcgtgctcctgcggccgctgaacggc
gtgctcgtgatggagcagctccactacgccgacgaggtgcggtcgatcaccgaggtgccg
attcccgacggcgaggtgaaggcgcaggagctcgcgctcgcgaagatgctcatcgcgcag
ggatcgaacgacgcgttcgagccgcagaaatacaaggacacggtgcgcgagcgcgtgatg
gacgcgatccagcgcaagatcgagggccaggacatcacgtccgacgtgacgcccgacggc
ggcggcaagatcatcgacctcatggaagcgctgaaggcgagcctcgccgcgcccggcgag
atgaagtcgcaggagctgcgcgcgtcgtga
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