Granulibacter bethesdensis CGDNIH2: GbCGDNIH2_1467
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Entry
GbCGDNIH2_1467 CDS
T03083
Name
(GenBank) Cell elongation specific D,D-transpeptidase
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
gbh
Granulibacter bethesdensis CGDNIH2
Pathway
gbh00550
Peptidoglycan biosynthesis
gbh01100
Metabolic pathways
gbh01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
gbh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GbCGDNIH2_1467
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GbCGDNIH2_1467
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gbh01011
]
GbCGDNIH2_1467
Enzymes [BR:
gbh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
GbCGDNIH2_1467
Peptidoglycan biosynthesis and degradation proteins [BR:
gbh01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
GbCGDNIH2_1467
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
AHJ68714
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Position
complement(1676065..1677918)
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AA seq
617 aa
AA seq
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MKREIKRSGVFTRRALALAGLQVGVIGTLAAKLYQVQVVEGQRYALLAKTNHISERLIAP
PRGHVLDRFGRPVATNRLHWLATLMTEETGDPDATLDNFHRLIPLDDHDRARIARDIRRH
RRFIPVVIKDYLSWEEMALIEVNAPDLPGIAIDVGTTRVYPYGETLAHVVGYVAPPSEHD
MGDDPILALPGVRIGRAGLEKFHDQPLRGRAGAMQLEVSAVGRVIRELDRQEGMPGSEVS
LTIDAELQRSVIARLGDESASAVVLDAKNGEVLAMATNPSFDPSLFDHGVSQDQWKEWTR
NRRAPLINKAVAGIYSPGSTFKMCVAIAGMESQLIGAGDRVFCPGYIDVGTARFHCWSKY
GHGSVDMHQALKFSCDVYFYEVARRVGMDRIANVANRMGLGVELGIELPNAKRGLIPTRA
WRAAKGHPWNVGDTIVAGIGQGYIQVTPLQLATYTARLATGRAVQPHLTRSIGGKAGSGT
RPEDWPELDISQAALKAVRGGMFAVVNEQHGTAPLARLPLPVQMAGKTGSTQVRRVSREL
RERGNFKSENLPWEFRPHALFVAYAPYDDPQYALAVVVEHGNAGAQAAAPVARDIMMDVL
SRDPANKKPGQTIAEKG
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgggaaatcaaacgcagcggcgtctttacgcgacgggctttggctctggccggt
ttgcaggttggtgtgatcggtacgctggcggccaaactgtatcaggtgcaggtcgtggag
gggcaacgctatgcgctgctggccaaaaccaaccatatcagcgagcgcctgatcgcgcct
ccgcgtggtcatgtgctggatcgtttcggcaggcctgttgctaccaacaggctgcattgg
ctggcaaccctgatgacggaggaaaccggagatccggatgccacactggataatttccat
cgattgatccctctggatgatcatgaccgtgcccgcatagcccgcgatatacgtcgtcat
cgccgctttatccctgttgtcatcaaggattacctcagctgggaagaaatggcgctgatt
gaggttaatgcgcccgatctgcccgggattgcgattgatgtcggcacaacccgcgtttac
ccctacggtgagacgctggcgcatgtcgtgggatatgttgccccccccagcgagcacgat
atgggtgatgatccgatccttgctttacctggggtgcggattggccgggctgggttggag
aaatttcatgatcagccgcttcgcggtcgtgcgggggcgatgcagctggaagtcagtgcc
gtcggacgtgtgatccgggagctggaccggcaggaaggcatgcccggcagcgaggtcagc
ctgacgattgacgctgaattacaacgctctgtcatagcgcggctgggggatgaaagtgcc
agcgccgtggttctggatgcgaaaaacggggaggtgctggccatggccaccaatccttcc
tttgatccatcccttttcgatcatggcgtttctcaggaccagtggaaagaatggacccgc
aaccgccgtgcgccgttgatcaacaaggccgtggccgggatctactcacccggatcgacc
ttcaagatgtgtgtggcgatcgccggtatggagtcccagcttatcggggcaggtgaccgg
gtattctgccccggctatatcgatgtcgggacggcacgcttccattgctggtccaaatac
ggccatggctcggtcgatatgcatcaggcactgaaattttcgtgtgatgtctatttttat
gaggtcgcacgtcgggtcgggatggaccgtattgccaacgtggcaaatcggatgggtttg
ggggtcgagcttgggatcgagctgccaaatgccaagcgaggattgattcccacccgtgca
tggcgggcagcaaagggacatccatggaatgtcggtgataccatcgtggccgggatcgga
cagggctatattcaggtcacgcctctgcaactggcgacttatacggcccgtctggccact
ggacgggccgtacagccgcatctgaccagaagcatcggtggtaaggcgggaagcggtaca
agacctgaggattggccggagctcgatatttctcaggctgccctgaaagcggttcggggg
gggatgttcgcggttgtgaatgagcagcatggtaccgcgccactggcacgacttcccctg
ccagtgcagatggccggaaaaactggctctacccaggtccgtcgcgtttcccgtgaattg
cgtgagcgcggtaattttaaatccgaaaatctgccatgggaattcaggccgcatgcgctg
tttgtcgcatatgcgccttatgatgatccccaatatgcactggcagtcgtggtggaacat
gggaatgcgggtgcccaggccgcagccccggtggcgagggacatcatgatggatgtgctc
tcacgcgatccggccaataaaaaacccggacagacaatcgcggagaaaggataa
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