KEGG   Citrifermentans bemidjiense: Gbem_3024
Entry
Gbem_3024         CDS       T00749                                 
Symbol
ribD
Name
(GenBank) 2,5-diamino-6-(5'-phosphoribosylamino)-4-(3H)-pyrimidinone deaminase and 5-amino-6-(5'-phosphoribosylamino)uracil reductase
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
gbm  Citrifermentans bemidjiense
Pathway
gbm00740  Riboflavin metabolism
gbm01100  Metabolic pathways
gbm01110  Biosynthesis of secondary metabolites
gbm01240  Biosynthesis of cofactors
gbm02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:gbm00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    Gbem_3024 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Gbem_3024 (ribD)
Enzymes [BR:gbm01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     Gbem_3024 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     Gbem_3024 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: ACH40026
UniProt: B5E857
LinkDB
Position
complement(3491761..3492870)
AA seq 369 aa
MADLHLKMMRLALAEARKGIGKTAPNPAVGCVIVRNGEVVGTGWHKKAGTPHAEVHALKA
AGDKAAGADAYVTLEPCSHFGKTPPCAKALIEARVARVFVAMVDPNPLVSGRGIQMLKDA
GIAVEVGLLKEESRELNLPFIKWIQTKLPYVVLKSALTLDGKSATASGDSKWVTSDRARR
EVHRLRGRLDAIMVGVGTVVKDDPLLTCRVPGGKDPLRVIVDSTLRIPLHAAILGVKSKA
ETVIATCSCDHAKMEALKAHGVEILTCCESDGRVDLADLFEKLGARGVQSVLLEGGSHLA
GAALRAGLIDKCMIFLAPKLVGGAGMGLFAGEGATLMADAIRLEQVRVKRVGVDLLVEGV
PVKTKSQNP
NT seq 1110 nt   +upstreamnt  +downstreamnt
atggccgatctacaccttaaaatgatgcgcctggcgcttgccgaggccagaaagggaatc
ggcaagacggcccccaaccccgccgtcggctgcgtcatcgtccgtaacggcgaagtggtc
gggaccggctggcacaaaaaggcggggactccgcacgccgaggtgcatgccttgaaggcg
gccggcgataaggcggccggcgccgacgcctacgttacccttgaaccctgctcccacttc
ggcaagacccccccctgcgccaaagccctcatcgaggcccgtgtggcgcgcgttttcgtc
gccatggtcgaccccaacccgcttgtttccgggcgggggatccagatgctcaaggacgcg
gggatagcagtcgaagtaggccttttgaaagaggagagccgcgagctgaacctccccttc
atcaagtggatccagaccaagctaccttacgtggtgcttaagagcgccctcaccctggac
ggcaagagcgccacggcaagcggcgactccaaatgggtgaccagcgaccgtgcccggcgc
gaagtgcaccggttgcgcgggcgcctcgacgccatcatggtcggtgtaggcaccgtggtg
aaggacgacccgcttctaacctgcagggttcccggcggcaaagacccgctgcgggtgatc
gtcgactcgaccctcaggataccgctgcacgccgcgatcctcggcgtcaagtcgaaagcc
gaaaccgtcatagccacctgcagctgcgaccatgcaaagatggaagcactcaaggcccac
ggggtcgagattctcacctgctgcgagagcgatgggcgagtcgatcttgccgacctcttc
gaaaagttgggtgcgcgcggcgtgcagtccgtgctgctcgaaggtgggagtcacttggcc
ggggccgctcttcgtgccgggctcatcgacaagtgcatgatctttctggcgccgaagctc
gtgggaggagccggcatggggctcttcgcaggggagggggcgacgctcatggcggacgcc
atacggctggagcaggtgagggtgaagcgagtgggagtcgacctcctggtggaaggcgtc
cccgtaaaaacaaaaagtcagaacccctaa

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