KEGG   Citrifermentans bemidjiense: Gbem_3042
Entry
Gbem_3042         CDS       T00749                                 
Symbol
tssC
Name
(GenBank) type VI secretion system needle sheath protein TssC
  KO
K11900  type VI secretion system protein ImpC
Organism
gbm  Citrifermentans bemidjiense
Brite
KEGG Orthology (KO) [BR:gbm00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:gbm02044]
    Gbem_3042 (tssC)
Secretion system [BR:gbm02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   Gbem_3042 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: ACH40044
UniProt: B5E875
LinkDB
Position
complement(3508028..3509515)
AA seq 495 aa
MGEQDREPEVLYAEPLPAGGLLELIIQEGRLARGVCRREHAVDLVGELAQQVLEGGMTVS
RDTEQMINQRIAQLDALISAQVNEIIHHPEFQRLEASWRGLDHLVHQSETGANLKIRVLN
VSRRDLVQDMEKAAEFDQSALFKKVYEEEFGSYGGASYGCLVGDFEFGNTPQDLSLLTRI
SEVAAAAHAPLLTAASPSLFNMETFGELDRPRDLAKIFQGPEYAKWKSFRISEDARYVAL
CLPRVLMRLPYGPDADPAELFQFNEDVDGTEHGNYLWGNAAYCLAERVTEAFAKYGWTAA
IRGVEGGGLVSDLPVHCFKTGEGEVAHKCPAEIAITDRREKELADLGFIPLVHCKGTDNA
AFFSAQSAHRPKSYDSDAANANARLSAQLQYILAVSRFAHYLKALMRDKVGSFDTRKNVE
DYLNRWISNYVLLDDDAGQEMKSRYPLREARVEVFEDPAKPGAYRAVAFLKPHFQLDELT
VSLRLVASLPAPARE
NT seq 1488 nt   +upstreamnt  +downstreamnt
atgggagagcaagatagggaaccggaagtactgtacgcggagccgctacctgcgggaggc
ctgctggagctgataatccaggaagggcgacttgcccgcggcgtctgtcgccgtgagcat
gcagtggaccttgtgggcgaactggcgcagcaggtccttgagggggggatgacggtgagc
cgcgacacggaacagatgatcaaccagaggatcgcccaactggacgcgctcatctccgcg
caggttaacgagatcatccaccatcccgaattccagaggttggaagcctcctggcgcggc
cttgaccatctcgtgcaccaaagcgagactggagccaacctgaagatcagggttctgaac
gtctcgcgccgggacctagtgcaggacatggagaaagcggcagagttcgatcagtccgcc
ctgttcaagaaggtgtacgaggaggagttcggcagctacggcggggcttcctacggttgc
ctggtgggtgacttcgaattcggcaacacgccgcaggatctttcgcttttgacacggata
tccgaggtcgcggctgccgcgcacgcaccgttattgaccgcagcgtctccttccctgttc
aacatggagaccttcggcgaactcgaccggcccagggacttggccaagatctttcaaggg
ccggaatacgccaagtggaaatccttccgcatctcggaggacgcccgttacgtggccctt
tgcctcccccgggtgctgatgcggctcccctacggacccgacgccgatccggctgaacta
ttccagttcaatgaggatgtggacggcaccgaacacggcaattatctctggggcaatgca
gcctattgtctggccgaacgggtgaccgaagctttcgcgaaatacggctggaccgcggcg
atcaggggagtggaaggtggcggtcttgtgagcgacctgccggtgcactgcttcaaaacg
ggggaaggggaagtagcccacaagtgcccggctgagattgccatcaccgaccggcgcgaa
aaggagctggcggacctgggcttcatcccgctggtccattgcaaagggaccgacaacgcc
gcgttcttcagcgcccaaagcgcacaccgtcccaagagctacgactccgatgcggccaac
gcgaacgcaaggctctcggcgcagttgcagtacattctcgccgtctcgcgattcgcgcat
tacctgaaggcgctgatgcgcgacaaggtcggcagcttcgacaccaggaagaacgtggag
gactacctcaaccgctggatcagcaactacgtgcttctggacgacgacgccggccaggag
atgaaatcgcgctacccactgcgggaggcccgggtggaggttttcgaagatcccgccaag
cccggtgcctaccgcgccgtcgcttttttgaagccgcacttccagcttgacgaacttacc
gtctcgctgaggcttgtggccagcctgccggcaccggcaagagaataa

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