Gymnogyps californianus (California condor): 127023916
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Entry
127023916 CDS
T08687
Name
(RefSeq) LOW QUALITY PROTEIN: integrin beta-4
KO
K06525
integrin beta 4
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl04510
Focal adhesion
gcl04512
ECM-receptor interaction
gcl04810
Regulation of actin cytoskeleton
gcl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127023916
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127023916
09142 Cell motility
04820 Cytoskeleton in muscle cells
127023916
04810 Regulation of actin cytoskeleton
127023916
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gcl04147
]
127023916
04515 Cell adhesion molecules [BR:
gcl04515
]
127023916
04090 CD molecules [BR:
gcl04090
]
127023916
Exosome [BR:
gcl04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
127023916
Exosomal proteins of bladder cancer cells
127023916
Cell adhesion molecules [BR:
gcl04515
]
Integrins
Integrin beta subunits
127023916
CD molecules [BR:
gcl04090
]
Proteins
127023916
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
fn3
Pur_ac_phosph_N
Calx-beta
PSI_integrin
I-EGF_1
EGF_2
SEA
Motif
Other DBs
NCBI-GeneID:
127023916
NCBI-ProteinID:
XP_050764196
LinkDB
All DBs
Position
19:8055106..8083978
Genome browser
AA seq
1825 aa
AA seq
DB search
MRRKRMDVLPRACAGLLLLSLLCATGLCQRSKNNRCVLSRAKSCTECIRVDKDCSFCTDE
SFEESRCNLRENLLRYGCREASIVYTRGEMRTQQNLSINRSLQRTQVSPQGMFMRLRAGE
EMSFNMDVFQPLESPVDLYILMDFSYSMSDDLDNLKSMGQNLAEFLQALTSNYTIGFGKF
VDKVSSPQTDMRPEKLREPWNNADSPFSFKNVIRLTSNINHFSQELRKERISGNLDXPEG
GFDAILQTAVCKDKIGWRKDSTHLLVFSTESAFHYEADGTNVLAGILARNDEQCHLDTSG
TYVYDTKQDYPSVPTLVRLLGQHNIIPIFAVTNHSYSYYEKLHKYFPISEIGVLQEDSSN
IVELLRTAFERIRSKMDIRADFVPKAMKTEFTTSLYEKTESGSFHITRGEVGKFNVRVKA
LEYVGSQHVCSLPEKDRQGVIHVKPTSLSDSLKVTASVICDACPCEQQQEFSSPKCSFHG
DFACGQCICHPGWRGDTCDCSPASSPNNEACIRPGDVEPCSGRGECLCGKCQCYSEDLTQ
RFDGAFCQYDVLQCPRTSGFLCNDRGRCSKGACVCESGWEGPGCECPTSNDTCIDSRGGI
CNNHGKCECGRCICDKASLYTSSTCETSYSLGFQAVCESIRDCVRCQAWGTGNTKGNCSA
CRLQIQMVEELKKAEASEYCSFQDEEDDCTYHYTLEGDPSVLPNTTVHVQKKKECPPGSF
LWLIPLLIFLILLLGLLLLLCWKFCACCKACLALLPCCARGRTVGFKEDHYMLRHSLMSS
DHLDTPMVRSGSLKGRDTVRWKINNNVHKQGFTSLAAANPKDLIPYGLSLRLTRLFTQNL
VKPDTRECEQLRKEVEENLNDIFKHIPGCHKLQQTKFRLQPNSGKRQDHTIVDTVLTAPR
SAKPEIIKVTEKHVSHEAFNDLKVSPGYYTVTSDQDAHGMVEFQEAVELVDVRVPLFIRE
DDDDEKQLQVEAIDVPTGIAEIGRRLVNITIIKEQASSLITFLQPAYSHSRFDKLAKIPV
LREIIDNGKSQVTYRTRDLTAKNGRDYIFTEGDLVFQPGETRKEVQVPLLELTEIDTLLH
NSQLKQFAIDLLHPKYGAKIGRYPQTTVTIADPEVVDGVPSMTGLSQVSQSPKGRLSAPL
NPNAHALSSREIRFSWFPPPGKPLGYKVKYWIQGDPESEAHLIDVKTPSAELSNLYPFCD
YEMQVCAYNAMGEGAYSDIIHCRTLEDVPSEPGRLAFNVVSSTVTQLSWAEPAETNGEIT
AYEVSYGLVNEDNVPIGPMKKVLVEDPKKRMVLIENLRESQPYRYMVKARNGAGWGPERE
ATINLATQPKRPMSIPIIPDVPIIDAEGGEDYDSYLMYSADVLRSPAGSKHPSVSDDSGS
RWKYVQLLGEDLDLRRITWRLPPETIPRLSDSSRFSSDTEGLLHEEDSDVATGSLRRSGT
PRPQAEHLLNGRVDFSFPGSGSGTLTRTVNTSYHQLSSHMQQEHRVMGSSSLTRDYSTML
MGHGEYSPKSPPXCSFFASDSRLPLGIPDTPTRLVFSALGPTSLKVSWQEPHCEKEVQGY
SVQYQLLNGGEVHRLTIPNPSQNSVVVEDLLPNHSYIFKVKAQSEEGWGPEREGVITIES
QVDPQSPLSPVPGSPFTLSTPSAPGPLVFTALSPDSLQLSWERPRKPNGSILGYMVTCEM
LHGGGEPRNIYVEGDNPETTLTVPHLSENVPYKFKVQAKTTQGFGPEREGIITIESQDGG
TFSQFGGQQYMREEVYNFPTEYTTKTSISHSSLDPHFTDGMLMTTQRVESASSTLTKQVT
KEFVSRTVMSSGTLTKQMERQFYEA
NT seq
5478 nt
NT seq
+upstream
nt +downstream
nt
atgaggaggaagaggatggatgtgctgccacgggcgtgtgccgggctgctcctcctgtcc
ctgctctgtgccaccggcctctgccaaaggagcaaaaataaccgctgcgtgctgtcccgg
gcgaagagctgcactgagtgcatccgagtggataaggactgttccttctgcactgacgag
agctttgaagagtctcgctgcaacttgcgggagaacttgctgcggtacggctgcagggag
gccagcatcgtgtacaccaggggcgagatgcggacccagcagaatctcagtatcaacagg
tccctgcagaggactcaggtgtccccccagggcatgttcatgcggctgcgagctggggag
gagatgagcttcaacatggatgtcttccagcccttggagagccctgtggatctctacatc
ctcatggacttctcctactctatgtctgatgatctggacaacctcaaaagcatgggccaa
aacctagcggagttcctgcaagccctgacctccaattacaccatcggattcggcaagttt
gtggacaaagtctcatcccctcagacagacatgagaccagagaagctgcgtgagccctgg
aacaacgctgactcccccttctccttcaagaatgtcatccgcctgaccagcaacatcaac
cacttcagccaggagctcaggaaagagcgcatctctggcaacctggatngccccgagggc
ggctttgatgccatcctgcagacagctgtttgcaaggataagatcggctggaggaaggac
agcactcacctgctcgtgttctccactgagtctgcctttcactacgaagctgatggtacc
aacgtcctggcagggatcctggcgagaaatgatgagcagtgtcacctagacaccagtggc
acctacgtgtatgacaccaagcaggactatccttcggtgcccaccctggtgcgcctgttg
ggccaacacaacatcatccccatctttgctgtcaccaaccactcctacagctactatgag
aagctgcacaagtatttccccatctctgagatcggggtgctccaggaggactcttccaac
atcgtggagctgctccgcacagcctttgagcgcatccgctccaagatggacatccgggca
gacttcgtccccaaagccatgaagacagagttcaccacctcattgtatgaaaagacagaa
tctggctccttccacatcacccgtggggaagtgggcaagttcaacgtgcgcgtgaaggca
cttgagtacgttggcagtcagcacgtctgcagcctccctgagaaagaccggcagggagtt
atccacgtgaagcccacgtccctgagcgacagcctcaaagttacagcctctgtcatctgt
gatgcgtgtccttgtgaacagcaacaagagtttagctcgcccaagtgcagcttccatggg
gactttgcttgtggacagtgcatctgccacccgggctggcgaggggacacgtgcgactgc
tccccggcgtcgtcccccaacaacgaagcctgcatccgccctggggatgtggagccgtgc
tcgggccggggtgagtgcctgtgcgggaagtgccagtgctactccgaggacctgacgcag
cggttcgacggggcattctgccagtacgacgtcctgcagtgcccgcgtacatccggcttc
ctctgcaatgatcgcggtcgctgctccaagggtgcgtgcgtgtgcgagagcggctgggag
ggtccgggctgcgaatgtcccacgagcaacgacacctgcattgacagccgagggggcatt
tgcaataaccatgggaagtgtgaatgcggtagatgcatctgtgacaaggcttcgctgtac
accagctccacctgcgaaaccagctactctctgggcttccaggctgtgtgcgagagcatc
cgggactgcgttcgctgccaggcctggggaacgggcaacacgaaagggaactgcagcgca
tgccgcctccagatccagatggtggaagagctgaagaaagcggaggccagcgagtactgc
tcattccaggatgaggaggacgattgcacgtaccactacaccctggagggagacccctct
gtccttcccaacaccaccgtccacgtgcagaagaaaaaagagtgcccgccagggagcttc
ctctggctcatcccgctgctcatcttcctcatcctgctcctggggctgctgctgctgctc
tgctggaagttctgcgcctgctgcaaggcttgcctggccctgcttccctgctgcgcacga
ggtcgcaccgttggcttcaaggaggaccactacatgcttcgtcacagccttatgtcctcc
gaccacctggacactcccatggtccgcagcgggtccctcaagggtcgggacacagtccgc
tggaagatcaacaacaatgttcacaagcagggcttcacctccctcgctgctgccaacccc
aaagatctcattccctatgggctgtctctgaggctgacccggcttttcacgcagaacctg
gtgaagccggacacccgggagtgcgagcagctgcgcaaagaagtggaggagaacctgaac
gacattttcaagcacatccccggctgccacaagctccagcagaccaagttcaggttacag
cccaattctgggaaaaggcaggaccacaccattgtggacacagttctcaccgcccctcgc
tcagccaagccagagatcatcaaagtgacggaaaagcacgtttcccacgaggctttcaat
gacctgaaggtttcaccgggttattacactgtgacctcagaccaagatgctcatgggatg
gtggagttccaagaggccgtggagctggtggatgtccgtgtcccactcttcatcagggag
gatgatgatgatgagaagcagctgcaggtggaggccattgatgtccccaccggcatcgca
gagattggacgcaggctcgtcaacatcaccatcattaaagaacaagccagcagcctcatc
accttcttgcagccagcctattcccacagccgctttgataagctggccaagatccctgtc
ctccgggagatcatagacaacgggaaatcccaagtcacctacaggacccgggatctcacc
gccaagaacggcagggactacatcttcacagagggtgacctggtcttccagcccggggag
acccgaaaagaggtgcaggtccccttgctggagctgaccgaaatagataccctcctacac
aacagccagctcaagcagttcgccatcgaccttctccatcctaagtacggcgccaagatt
ggccgatacccccagaccacggtgaccatcgctgacccagaggtggtggatggtgtcccc
tcgatgactggcctgagccaggtctcccagtcccccaaaggccgtctgagtgcaccgctt
aatcccaatgcccacgctctcagctccagggaaatccgcttcagctggtttcctccacca
ggaaaacctctggggtacaaggtgaaatactggatccaaggggaccccgagtcagaagcc
cacctcattgatgtcaaaacaccatcagcagagctgagtaacctctaccccttctgcgac
tacgagatgcaagtctgcgcctacaatgccatgggtgaaggggcttactccgacatcatc
cactgccgcacgcttgaggatgtccccagcgagcccggccgcttggctttcaatgttgtg
tcttccaccgtgacgcagctgagctgggctgagcctgcagaaaccaatggggagatcaca
gcttatgaagtcagttatggactcgtcaacgaggacaacgtacccattggcccaatgaag
aaggtgctggttgaagacccaaagaagcgcatggtgctgatagaaaacctgcgggagtcc
cagccctaccgctacatggtgaaggccagaaatggtgctggttggggacctgagagagaa
gccaccatcaaccttgctacgcagcccaagcgcccgatgtccatccccatcatccctgac
gtccccatcattgatgcagagggaggtgaggactacgacagctacctgatgtacagcgca
gatgtgcttcgctctccagctggcagcaagcatcccagtgtctctgatgattcaggctcc
aggtggaaatatgtgcagctgctgggagaagacttggatcttcgccgcatcacctggagg
ctcccacctgaaaccattccccgcctctctgacagcagccgcttctcctcagacaccgag
ggtctcctccacgaggaggacagcgacgtggctactggcagcctgaggaggagcgggaca
ccccggccccaagcagagcacttgctgaacggccgggtggacttctccttccccggcagt
ggcagtggcacactgaccaggacagtgaacaccagctaccaccagctgagctcacacatg
cagcaggagcacagggtgatggggagctcctcactgacaagagactactccacgatgctg
atggggcacggtgagtactcccccaaatctccaccctgatgttccttttttgcctcagac
tccaggctgccgctgggcatccccgacacccccacgcgcctggtgttctctgccctggga
cccacgtccctgaaggtgagctggcaggagccgcactgcgagaaggaggtgcagggctac
agtgtgcagtaccagctcctcaatggaggagaggtgcaccgactcaccatccccaacccc
agccagaactcggtggtggtagaggacctgctgcccaaccactcctacatcttcaaggtg
aaggcgcagagtgaggaaggctggggccccgagagggaaggagtcatcaccatagagtcc
caggtggacccgcagagcccgctcagccctgtaccaggttcacccttcacgctgagcaca
cccagtgctcccggaccgctggttttcactgccctcagccctgactccctccagctcagc
tgggagagaccccgcaagcccaatggctccatcttgggctacatggtcacctgtgagatg
ctgcatggaggaggggagcccaggaatatctatgtcgaaggagacaatccggaaactacc
ctgactgtgccccacctgagtgagaatgtcccatacaagttcaaagtgcaagccaagacg
acccaaggctttgggccagagagagaaggcatcatcaccattgaatctcaggatggaggc
actttctcccagtttggaggacagcagtacatgagagaagaagtgtacaacttccccacc
gaatacaccaccaaaaccagcatcagccattcctctctggatccccacttcacagacggc
atgctcatgacgacccagcgagtggagagcgccagcagcaccctcaccaaacaggtcacc
aaagagtttgtgagccggaccgtgatgtccagtgggaccctcaccaaacagatggagagg
cagttctatgaggcctga
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integrated database retrieval system
