Geobacter sp. M18: GM18_3410
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Entry
GM18_3410 CDS
T01421
Name
(GenBank) succinate dehydrogenase or fumarate reductase, flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
geb
Geobacter sp. M18
Pathway
geb00020
Citrate cycle (TCA cycle)
geb00190
Oxidative phosphorylation
geb00650
Butanoate metabolism
geb01100
Metabolic pathways
geb01110
Biosynthesis of secondary metabolites
geb01120
Microbial metabolism in diverse environments
geb01200
Carbon metabolism
Module
geb_M00009
Citrate cycle (TCA cycle, Krebs cycle)
geb_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
geb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
GM18_3410
00650 Butanoate metabolism
GM18_3410
09102 Energy metabolism
00190 Oxidative phosphorylation
GM18_3410
Enzymes [BR:
geb01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
GM18_3410
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Pyr_redox_2
AlaDh_PNT_C
NAD_binding_8
GIDA
Motif
Other DBs
NCBI-ProteinID:
ADW14844
UniProt:
E8WLQ8
LinkDB
All DBs
Position
complement(3979861..3981774)
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AA seq
637 aa
AA seq
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MILDGKCPKGPIQTSWDRHRFDMKLVNPANKRKYKILVVGTGLAGGAAAATLGELGYNVE
AFCYQDSARRAHSIAAQGGINAAKNYPNDGDSVYRLFYDTIKGGDFRAREADVWRLAQVS
NNIIDQCVAQGVPFARDYAGYLDNRSFGGAQVSRTFFARGQTGQQLLLGAYSALSRQVKA
GSVKLFARTEMLDLVVVDGEAKGITVRDLITGEIRTHVGDAVVLCTGGYVNVFYLSTNAM
GCSVTANWRAHKKGAYFANPCYTQIHPTCIPQTGEHQSKLTLMSESLRNDGRCWAPKKKG
DNRAPGEIPEEDRDYYLERKYPSFGNLAPRDIASRAAKEQCDDARGVGPGGRGVYLDFAD
SIKRLGEDTIRSRYGNLFEMYEKITDENAYKVPMRIYPAPHYSMGGLWVDYNCESNVPGL
FVLGEANFSVHGANRLGASALMQGLADGYFVIPYTIANYLAKIKPGTVKADHPECKKSVE
DVTNYNNKLLNINGKKTVSEFHRELGKIMWENVGMARSEESLKDAIKKIPVLREEFWKNV
KVTGTGPELNQQLENAGRVADFLEFGELLAKDALHRNESCGGHFRTEHQMPDGEAKRDDE
NYCYVGAWEFKGVDKEPELHKEPLTFENVHLAVRSYK
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
gtgatactcgacggaaaatgtccgaaaggaccgattcagacctcgtgggacagacaccgc
tttgacatgaagctggtcaaccccgccaacaaacgtaaatacaagatcctcgttgtcggc
accggcctggccggtggcgcggccgcagcaaccctcggtgagctcggctacaacgtcgaa
gccttctgctatcaggacagcgcacgccgcgcccactccatcgcagcccagggcggcatc
aacgccgccaagaactaccccaacgacggcgacagcgtctaccgcctgttctacgacacc
atcaaggggggcgacttccgtgcccgcgaggctgacgtctggcgtctggcccaggtgtcc
aacaacatcatcgaccagtgcgtggcccagggcgtaccgttcgcccgcgactacgccggc
tacctggacaaccgctccttcggcggcgcccaggtctcccgtaccttcttcgcccgcggc
caaaccggccagcagctcctcctgggcgcctactcggcgctctcccgccaggtgaaggca
gggagcgtcaagctcttcgcccgcaccgagatgctggacctggtggtggtggacggcgag
gcgaaggggatcacggtccgcgacctgatcaccggcgagatccgcacccacgtgggtgac
gcggtggtgctctgcaccggcggatacgtgaacgtgttctacctctccaccaacgcgatg
gggtgctccgtgaccgccaactggcgcgcgcacaaaaagggcgcctacttcgccaacccc
tgctacacccagatccacccgacctgcatcccgcagaccggcgagcaccagtccaagctg
accctcatgtccgagtcgctcagaaacgacggccgctgctgggctcccaagaagaagggg
gacaaccgcgccccgggcgagatcccggaagaggatcgcgactactacctggagaggaaa
tacccctccttcggtaacctggctccgcgtgacatcgcctcccgcgccgccaaagagcag
tgcgacgacgcccgcggcgtcggacctggcggccgtggtgtctacctcgacttcgccgat
tccatcaagcgtctgggcgaggacaccatccgctcacgttacggcaacctcttcgagatg
tacgagaagatcaccgacgagaacgcctacaaggtgccgatgcgcatctacccggcaccg
cactactccatgggcggcctctgggtcgactacaactgcgagagcaacgttccgggcctc
ttcgtcctgggcgaggcgaacttctcggttcacggcgcgaaccgcctgggcgcttccgcg
ctgatgcagggtctggccgacggctacttcgtcatcccctacaccatcgccaactacctc
gcgaagatcaagccgggcaccgtcaaggcggatcaccccgagtgcaagaagtcggtcgag
gacgtgaccaactacaacaacaagcttctcaacatcaacggcaagaagactgtttccgag
ttccaccgcgaactgggcaagatcatgtgggaaaacgtcggcatggcgagaagcgaagag
agcttgaaggacgccatcaagaagatcccggtcctgcgcgaggagttctggaagaacgtc
aaggtcaccggtaccggcccggagctgaaccagcagctggagaacgccggccgcgtagcc
gacttcctggagttcggcgaactgcttgccaaggacgcactgcacaggaacgagtcctgc
ggcggccacttccgcaccgagcatcagatgccggacggcgaagcgaagcgcgacgacgag
aactactgctacgttggagcctgggagttcaaaggtgtcgacaaggagcccgaactgcac
aaggagccgttgacgttcgagaacgttcatctggcggtaaggagttataaataa
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