Geminocystis sp. NIES-3708: GM3708_379
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Entry
GM3708_379 CDS
T04168
Name
(GenBank) oligopeptide transport ATP-binding protein OppF
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
gee
Geminocystis sp. NIES-3708
Pathway
gee02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
gee00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GM3708_379
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gee02000
]
GM3708_379
Transporters [BR:
gee02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
GM3708_379
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
oligo_HPY
SMC_N
AAA_22
RsgA_GTPase
AAA_16
NB-ARC
AAA_29
Mg_chelatase
PRK
NACHT
AAA_5
TsaE
MMR_HSR1
nSTAND1
RNA_helicase
AAA_19
AAA_13
AAA_15
AAA
ATP-synt_ab
nSTAND3
AAA_14
MobB
AAA_23
NTPase_1
G-alpha
BRR2_plug
Motif
Other DBs
NCBI-ProteinID:
BAQ59973
UniProt:
A0A0D6AB50
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Position
435106..436752
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AA seq
548 aa
AA seq
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MNSPLLEILNLGVAYGTTNNGDNSNSISWAVNDVSFNLNYGEVLALVGESGCGKSTLGRA
IIRLLPEKTKVEGVANFKGEAIFAYDNQALRKFRGEAVALVFQDPMTRLDPLMTIGDHCI
ETLKAHQPKLSPQEAKKKALSTLATVKISPDRFNQYPHEFSGGMRQRVAIALALLLEPKL
IVADEPTTSLDVTIASEILAELTSLCRERDMALLLISHDLAMVGKYCDRIGVMYQGKMVE
MGKVQDVIYAPNHEYTKSLLAAAFHLHKPSELVVEEIKENETPLLELKNLKQYYSLESNF
IEQIFGKKSQTIKAVDELNLTIWQGEILGLVGESGCGKSTLSRTILQLIRATSGKVNFEN
RDLTTLPEREIRSIRKEIQMIFQDPHACLNPMMTIGESIIEPLLIHQMGNQQKNKQRVET
MLNRVGLNPQEYYNRYPKELSGGQQQRVAIARALITNPKLVICDEPVSMLDATVQAQVLD
LILELKKEFNLTYLFITHDLSVARFLCDRIAVMNHGKIVELGNTESIFKNPQHSYTKSLL
SSAFTFKN
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgaattcacctttattagaaatccttaaccttggagtggcttatggcactactaataac
ggtgataactccaactctattagttgggctgttaatgatgtttctttcaacctcaattat
ggggaagttttagccttagtcggcgagtctggttgcggaaaatccaccttaggcagggcg
ataatacgattattaccagaaaaaactaaggttgaaggtgtggcaaatttcaaaggagaa
gctatttttgcctatgacaatcaagccttacgcaaatttagaggagaagcagttgcgtta
gtatttcaagatcccatgacaagattagatcctttaatgacgataggggatcattgtatc
gaaacattgaaagctcatcaacctaaattatcaccacaagaagcgaaaaaaaaagcctta
tctacccttgccaccgtcaaaatttctcctgatagatttaatcaatatccccatgagttt
agtggtggtatgcgtcaacgggttgccatcgcccttgctttattattagagccgaagttg
atcgttgctgacgaacctactactagccttgatgtcactattgcttcggaaattttagct
gaattaacttctttgtgtcgtgagcgagatatggctttattattgatttctcacgattta
gcgatggtagggaaatactgtgatcgcattggggtaatgtatcaaggtaaaatggtagaa
atgggtaaagtgcaagatgtaatctatgctccgaatcatgaatatacaaaatctctgtta
gcggctgcctttcacttacataaaccctcagaattagttgtcgaagaaataaaagaaaat
gaaacccctttattagaattaaaaaatctcaaacaatactatagtttagaaagtaatttt
attgagcaaattttcggcaaaaaatcccaaacaattaaagcagtagatgaactaaattta
accatttggcaaggagaaattttaggtttagtgggggaatctggttgtggcaaaagtact
ctttctcgaacaattttacaattaattagagctaccagtggaaaggttaattttgaaaat
cgagatttaactactctacctgaaagggaaattagaagcataagaaaagaaatacagatg
atttttcaagatcctcatgcttgtcttaatcccatgatgacgataggagaatcgataatt
gagcctttattaattcatcaaatgggcaatcagcagaaaaataagcaacgagtagaaacg
atgttaaatcgggtgggattaaaccctcaagaatattataaccgttatccgaaagaactt
tcaggaggacaacaacaaagagtcgccatcgcaagagcattaattactaacccgaaatta
gtgatttgtgatgaacccgtaagtatgttagatgctacagtacaagcacaagtcttagat
ttaattttagagcttaaaaaagaatttaatttaacttatttattcatcactcatgattta
tctgtagctagatttttatgcgatcgtattgctgttatgaatcatggtaaaatagtggaa
ttaggaaacacagaaagtatttttaaaaatcctcaacattcttatacaaaatctctttta
tcttctgcatttacctttaaaaattaa
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