Geobacillus sp. LC300: IB49_10735
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Entry
IB49_10735 CDS
T04018
Name
(GenBank) RNA polymerase factor sigma-70
KO
K27000
RNA polymerase sigma-H factor
Organism
gel
Geobacillus sp. LC300
Brite
KEGG Orthology (KO) [BR:
gel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gel03021
]
IB49_10735
Transcription machinery [BR:
gel03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
IB49_10735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
GerE
HTH_23
HTH_38
Sigma70_ECF
HTH_28
UPF0122
Sigma70_r4
HTH_29
HTH_30
HTH_16
DUF1676
HTH_Tnp_Tc3_1
Terminase_5
Motif
Other DBs
NCBI-ProteinID:
AKU26836
LinkDB
All DBs
Position
2020764..2021414
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AA seq
216 aa
AA seq
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MAECLKVDKPKDYKHLEDEQLVALVHEGDGEALDFLIHKYQNFVRAKARSYFLVGADRED
IVQEGMIGLYKAVRDFKGDKLSSFKAFAELCITRQMITAIKTATRQKHIPLNSYVSLDKP
IYDDESDRTLMDVLSGTQVTDPEELIVNREEVDDIELKMAELLSDLERKVLALYLDGRSY
QEISEELNRHVKSIDNALQRVKRKLEKYLEYREISL
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
gtggcggaatgcttaaaagtagacaagccaaaggattataaacatttagaggatgaacag
cttgttgcacttgttcacgaaggggatggagaagcgcttgattttttgatccacaaatac
caaaactttgtgcgcgccaaagcccgctcatactttttagtcggggctgaccgcgaggac
atcgtgcaggaagggatgatcgggctgtacaaggcagtccgcgattttaagggggacaag
ctctcttcatttaaagcatttgcagaactatgcatcacgaggcaaatgattaccgcgatt
aaaaccgcgacccgccaaaagcacattccgctcaactcttacgtttccttggacaagccg
atttacgacgacgagtcggaccggacgctgatggacgtgttgtccggcacacaggtgacc
gacccggaagagctgattgtcaaccgcgaggaagttgacgatattgagctgaaaatggcg
gaattgctcagcgatttggaacggaaagtgctcgcgttgtatttggacgggcgctcgtac
caagaaatttccgaagagttaaaccgccatgtcaaatcgatcgacaacgccttgcagcgc
gtcaaacggaagttggagaaatatttggaatatcgggaaatcagtttgtag
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