Geobacillus sp. LC300: IB49_18040
Help
Entry
IB49_18040 CDS
T04018
Name
(GenBank) IclR family transcriptional regulator
KO
K19333
IclR family transcriptional regulator, KDG regulon repressor
Organism
gel
Geobacillus sp. LC300
Brite
KEGG Orthology (KO) [BR:
gel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gel03000
]
IB49_18040
Transcription factors [BR:
gel03000
]
Prokaryotic type
Helix-turn-helix
IclR family
IB49_18040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR
HTH_IclR
TrmB
MarR
HTH_23
Fe_dep_repress
MarR_2
HTH_29
HTH_36
HTH_11
MCM_C
B-block_TFIIIC
Rrf2
HTH_7
HTH_28
RPA_C
PadR
HTH_24
FUR
HTH_20
HTH_27
TnsD
HTH_45
LexA_DNA_bind
HTH_5
HTH_40
HTH_Crp_2
HTH_PafC
Sigma70_r4_2
HTH_38
Dimerisation2
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
AKU27948
LinkDB
All DBs
Position
3427811..3428596
Genome browser
AA seq
261 aa
AA seq
DB search
MEKENIVKSVSRALQIIDIVSAKKDGLGVTEIAKQMDINKSSVYRILTTLAQYGYIEQHP
ETERYKLGYKFLEISSKLLDSIDLRQEARPYLRQLEKETNEVVHLVVYDQGEVIYIEKLE
GTETLRMHSKVGKRAPMHCTAVGKAILASLPPAVAAEIIDRKGLPRHTDWTITDREAFFR
ELDTIRQNGYALDLEENEYGIRCVAVPIFDYTGSVVAAVSVSGPTLRMTDDRIMRLAARM
RQIGKELSARLGHRPIHSVQP
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagaaaatatagtgaaatctgtaagtcgggcgttgcaaattattgacatcgtc
agtgcgaaaaaagacgggctaggcgtgacggaaatcgcgaaacaaatggacattaacaaa
agttccgtctaccgcattttaacgacgctcgcccaatacggctacatcgagcagcatccg
gaaacagagcggtacaagcttggctacaagtttttggaaatcagctcgaaactgcttgac
tcgattgatttgcgccaagaggcgcgtccgtatttgcgccagctcgagaaagagacgaac
gaagtggtccatctcgtcgtctatgaccaaggggaagtcatttatattgaaaaattggaa
ggaacggaaacgctgcgcatgcattcgaaagtcggcaagcgggcgccaatgcattgcacg
gccgttggcaaggcgattttagccagcttgccgccggctgtcgccgccgagatcatcgac
cggaaagggttgcccagacataccgattggacgatcaccgaccgcgaggcgtttttccgc
gagcttgacaccattcggcaaaacggatatgcgcttgacctggaagaaaatgaatatggc
atccgctgcgtcgcggtgccgattttcgactatacaggaagcgttgtcgccgccgtcagc
gtttccggcccgacgctccgcatgacggatgaccgcatcatgaggcttgctgcgcgcatg
cgccaaatcggcaaagaactctccgcccggctcggccatcggccgattcattccgtccag
ccgtaa
DBGET
integrated database retrieval system
