Geminocystis sp. NIES-3709: GM3709_821
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Entry
GM3709_821 CDS
T04142
Name
(GenBank) cyanobacteria-specific RpoD-like sigma factor
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
gen
Geminocystis sp. NIES-3709
Brite
KEGG Orthology (KO) [BR:
gen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gen03021
]
GM3709_821
Transcription machinery [BR:
gen03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GM3709_821
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
Stathmin
Motif
Other DBs
NCBI-ProteinID:
BAQ64056
UniProt:
A0A0D6AMK7
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All DBs
Position
924633..925631
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AA seq
332 aa
AA seq
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MSTAKITARINEIDKRKVSTVDMVRTYLQEIGKVPLLSHEQEIVFGKQVQQMMTLQNIKQ
ELAKDLNREPSIEEWATAVDKTPDEIKKITHQGKRAKQKMIEANLRLVVAIAKKYQKRNM
EFLDLIQEGSLGLERGVEKFDPTKGFKFSTYAYWWIRQAITRAIAQQARTIRLPIHITEK
LNKIKKTQRELSQKLGRSPSPNEIAVALELEPSQIREYFSIARQPISLDVKVGDNQDTEL
SELLEDDGISPDSYITQELMRQDLHKLLGELTPQQQQVVKLRFGLEDGKELSLAKIGQRM
NISRERVRQLEQQALAHLRKKRSSVKEYIVAS
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgctaaaattaccgctagaataaacgaaattgataaaagaaaagtcagtaca
gtagatatggtgcgtacctatctgcaagaaatcggtaaagttcctcttttaagtcatgaa
caggagattgtttttggaaaacaagtacaacaaatgatgactttgcagaatatcaaacaa
gaattagccaaagacttaaatagagaacctagtatagaagaatgggctactgctgttgat
aaaactcctgatgaaatcaaaaaaattactcatcaaggtaaacgtgccaagcaaaaaatg
attgaagccaatctgcgattagtagtggcgatcgccaaaaaatatcagaaaagaaatatg
gagtttttggatttaatccaagaaggaagtcttggtttagaaagaggagtggaaaaattc
gatcccacaaaaggcttcaagttctctacttatgcttattggtggattcgtcaagctatt
acccgtgccattgcacaacaagcaagaactattagactgcctattcatattaccgaaaaa
ctcaataaaatcaaaaaaactcaaagagaattatctcaaaaactaggcagaagtccatct
cctaatgaaatagctgtcgctttagaattagaaccttctcaaattcgggaatatttcagt
atcgcccgtcaacccatatccttagacgtgaaagtgggagataaccaagacactgaacta
tcggaactattagaagatgatggtatttctcctgatagctatatcactcaagaattgatg
cgtcaagacttgcataaattgctaggagagttaactccccaacagcaacaagtggtaaaa
ctcagatttgggttagaagacggtaaagaattatctttggctaaaataggacaaagaatg
aatatcagtcgtgaaagagttaggcagttagaacaacaagccttggctcatttgagaaaa
aaacgtagcagtgttaaagaatatattgtggcaagttaa
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