Geotalea daltonii: Geob_3446
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Entry
Geob_3446 CDS
T00846
Symbol
recJ
Name
(GenBank) single-stranded DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
geo
Geotalea daltonii
Pathway
geo03410
Base excision repair
geo03430
Mismatch repair
geo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
geo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Geob_3446 (recJ)
03430 Mismatch repair
Geob_3446 (recJ)
03440 Homologous recombination
Geob_3446 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
geo03400
]
Geob_3446 (recJ)
DNA repair and recombination proteins [BR:
geo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Geob_3446 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Geob_3446 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Geob_3446 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ACM21789
UniProt:
B9M5N0
LinkDB
All DBs
Position
complement(3811159..3812883)
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AA seq
574 aa
AA seq
DB search
MHHKLEKRWELRKSEPDDVERLVSAGVATPLLARLLLNRVPCDCKAAASFFTSSLAELHD
PYMLLGMESAVERLLRAAVGKEKICIHGDYDVDGITSVVLLLTFFQTIGIDACYIIPDRL
VDGYGLSADAVDKAARLKTDVMVTVDCGITALAEAKLCAEAGIDLIITDHHTPGEALPDA
CAVINPNQKGCNYPFKALAGVGVAFNLVIALRSRLRAEGFFSGRAEPNLREYLDLVALGT
IADVVPLIDQNRILAKYGLMELSQSHRPGIQALKRVAGITGDVGCGAVGFRLAPRLNAAG
RLENAAMAVELLLCKDLKSAEPLAAALDASNAERQAVEREILNDALQMVRDDAAFKGRKS
IVLASEEWHSGVIGIVASRLVDLYHRPTILIALKDGNGKGSGRSIAGFHLHEALTACAEH
LVKFGGHKHAAGLAIAEETLQAFVERFNEIADGLLTPEDLIPVLLIDAELKAEDLTLDLV
SELERMKPFGMGNPEPVFLLQDAEVLESRIVKDTHLKLRLQVEAKKFEAIAFSMAGRVSV
GERIDLAFSPAINNWNGRSSLQLTVKDLRRAGGI
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgcaccataaactggaaaaaaggtgggagctgagaaagagcgagccggatgatgtggag
cggcttgtgagtgcgggggtagctaccccccttcttgcaaggctgcttcttaaccgcgtc
ccctgcgactgtaaagcagctgcctcgttctttacctcaagtctcgccgaacttcacgac
ccatatatgctgctcggtatggaatctgcggtggaaaggcttttgcgggccgctgtcggc
aaggaaaaaatctgcattcatggcgactacgatgtggatggtataacctcggtggtgctg
ctgcttactttttttcagaccatcggtattgatgcctgttatatcattccggatcgcctc
gttgatggttatggcctttctgcagacgccgtagataaggctgcccgactcaaaacggac
gtcatggtgaccgtcgactgcggcatcaccgcactggccgaggccaagctctgtgccgaa
gccggcatcgacctgattatcaccgatcatcacactcctggggaagccctgcccgatgcc
tgcgccgtcattaatcccaaccagaagggatgcaactatccattcaaagctctcgccggt
gtcggcgttgcattcaatctggtcattgccctgagaagccgccttcgggcagagggtttc
ttctccggcagggcagagccaaatctgcgggaatatcttgatctggtggcccttggcacc
attgctgacgttgttccgctcatcgatcaaaaccggatccttgccaaatatggtttgatg
gagttaagccaatcccatcggccgggtatccaggcactgaagagggttgccgggataaca
ggagatgtaggctgcggcgcggtggggttccgcctggctcccaggctcaatgctgcggga
cggttggagaacgccgcaatggctgtggaacttcttctctgcaaagatctgaagagcgct
gagcctttggcggcagctctggatgccagcaatgccgagcggcaggctgtggagcgggag
atactgaatgatgccctgcagatggtgagggatgatgcagccttcaaagggaggaaaagt
attgttcttgcctcggaagagtggcattcgggggtgataggtattgtggcatccaggctg
gtggatctttaccatcgcccgacgattctcattgccttgaaagacggcaatggcaaaggt
tccggccgcagtatcgccggctttcacctgcacgaggccctgactgcatgcgccgagcat
ctggtgaaattcggcggtcacaaacatgcagccgggcttgcaattgccgaagagaccctg
caagcattcgtcgaaaggttcaatgagatagccgatgggctgctcaccccagaggatctg
ataccggtgcttttgatcgatgccgagctgaaggcagaagatcttaccctggatctggtg
tcggaactggagcggatgaagccttttggtatggggaacccggaaccagtgtttctcctc
caggatgcggaggtcctggagagccggatagtgaaggatacccatctgaaattacgcctg
caggttgaggcgaagaaattcgaggcgatcgccttttccatggcagggagggtttcggtg
ggagaacgcattgacctagccttttcccctgctataaataactggaatggcagaagttct
ttgcagttgacggtgaaggatctgcgcagggcagggggcatatag
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