Geospiza fortis (medium ground-finch): 102033641
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Entry
102033641 CDS
T03755
Symbol
CHPF2
Name
(RefSeq) chondroitin polymerizing factor 2
KO
K03419
chondroitin polymerizing factor 2 [EC:
2.4.1.226
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
gfr01100
Metabolic pathways
Module
gfr_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
102033641 (CHPF2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
gfr01003
]
102033641 (CHPF2)
Enzymes [BR:
gfr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
102033641 (CHPF2)
Glycosyltransferases [BR:
gfr01003
]
Glycan extension
O-Glycan
102033641 (CHPF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CHGN
Fringe
Motif
Other DBs
NCBI-GeneID:
102033641
NCBI-ProteinID:
XP_005430620
LinkDB
All DBs
Position
Un
AA seq
675 aa
AA seq
DB search
MYFLYRTRYIQTELGFHERLFVAVLTSKATLNTLAVAVNKTVAHHFPRLLYFTGLRGAKV
PHGMVLVAHGDERPIWLMYETMNYIHQHFGSDYDWFYIMQDDTYTQAEQVKALVTHLSIN
QDVYLGRAEEFIGGDEQARYCHGGFGYLLSRSLLLKLHPHLDSCRNEILSVRPDEWLGRC
IIDFLGITCVSQLQGQHYRTYELAKNTEPEKEEEEDFQAALAVHPVSDMTLMYRLHKQVS
RIQLDRVYQEIQDLQMQIRNLTALTPAGEAGVTWPVGINAPFLPKSRFEVISWDYFTEQH
LFSCPDGSPKCELSGASKADVSEIIESAVEQLNRLYQPLLRFSKRQLLNGYRRFDPTRGM
EYTLDLLLEAATQKGHSHVLAKRVSLVRPLSKVEIIPMPYVTEATRVQLVLPLTVQDLDF
VANFLDMFAMNTLDTHDNALLTLLFIYHPYDAQRVGQMDVFAGVKAMVGELEKRYADVKI
PWISVKTEVPSQVKLMDIVSKKHPVDTLFFLASVWTEINMEFLNRCRMNTISNWQVFFPV
HFQEFNPALVYRGEQTASSNTDFLRDGHFDRHSFAEACFYNSDYMTARTKLAADILDRDE
VLESMEVFDVFLHYSGLHLFRAVEPGLVQKYTQRSCNPRLSEELYHRCVLSNLEGLASRS
HLAMALFEQEQANST
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgtacttcctttacagaactcgctacattcagacagaactgggattccatgagaggctg
tttgtggctgtgctgacctccaaggccacgctgaacacgctggccgtggcagtgaacaag
accgtggcccaccacttcccccgcctgctgtacttcaccgggctgcgcggtgccaaggtg
ccccatggcatggtgctggtggcccacggtgacgagaggcccatttggctcatgtatgag
accatgaactatatccatcaacattttggctctgactatgactggttctacatcatgcag
gatgacacctacacccaagctgagcaggtcaaggctctggtgacacacctgagcattaac
caagatgtgtacctggggcgagcggaggagttcattgggggagacgagcaggcccggtac
tgtcacgggggctttggctacctgctatcccggagcctcctgctaaagctccacccacac
ctggacagctgccgcaatgagatcctcagtgtgcgcccagatgagtggctaggtcgttgc
atcattgatttccttggcatcacttgtgtttcccagctccagggccagcattatcgcact
tatgagctagccaagaatactgagccggagaaggaggaggaagaggacttccaagcagct
cttgcagtgcaccctgtttctgacatgaccctgatgtaccggctgcacaagcaggtcagc
aggatccagctggacagagtctatcaggagatccaggacctccagatgcagatcaggaac
ctcacagcactgacccctgcaggtgaggcaggtgtgacctggcctgtgggcattaatgcc
ccgttccttccaaagtctcgttttgaggtgatcagctgggactacttcacggaacagcac
ctgttctcctgtcctgatggctccccaaagtgtgagctctctggagccagtaaggcagat
gtcagtgagatcatcgagtctgcggtggagcagctgaaccgtctctatcagcccctgctc
cgcttcagcaagcggcagctgctgaatggctaccggcgcttcgaccccacacggggcatg
gaatacaccctggacctgctcctggaggctgccacccagaagggtcacagtcatgttctg
gccaagcgagtcagcttggtccgacccttaagcaaggtggaaattattcccatgccatat
gtgacagaggccacacgagtgcaattggtgcttcccttgacagtgcaggacctggatttt
gtagcaaacttcctggatatgtttgctatgaacacactggacacacatgataatgccttg
ctgactttgctttttatctaccatccctacgatgcccagagagttggtcagatggatgtt
tttgctggagtcaaagccatggtaggagagctagagaaacgctatgccgacgttaaaatc
ccgtggattagtgttaaaactgaggtaccatcgcaagtcaagctcatggatatagtctca
aagaagcaccctgtggacacactgtttttcttggccagcgtctggaccgaaatcaacatg
gagtttcttaaccgctgccgcatgaataccatcagcaactggcaagtcttcttccctgtg
catttccaggagttcaaccctgcgctggtgtaccgtggtgagcagacagcatcctccaac
actgacttcctgagggacgggcattttgacagacattcttttgctgaggcctgcttttat
aattctgactatatgacagcacgtaccaagctcgcagctgatatcctggaccgagatgag
gtgctggagagcatggaggtatttgatgtcttcctgcactattctggcctgcacctgttc
agggctgtggagccggggctagtgcagaaatatacacagagaagctgcaatccccggctc
agcgaggagctgtaccaccgctgtgtgctcagtaacttggaaggacttgcatcccgctca
catttagccatggccctctttgagcaggaacaggccaacagcacttga
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