Gossypium hirsutum (upland cotton): 107886845
Help
Entry
107886845 CDS
T04793
Name
(RefSeq) beta-amylase isoform X1
KO
K01177
beta-amylase [EC:
3.2.1.2
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00500
Starch and sucrose metabolism
ghi01100
Metabolic pathways
ghi01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
107886845
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.2 beta-amylase
107886845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_14
Glyco_hydro_35
Motif
Other DBs
NCBI-GeneID:
107886845
NCBI-ProteinID:
XP_016666415
UniProt:
A0A1U8HK35
LinkDB
All DBs
Position
A03:complement(107284689..107287831)
Genome browser
AA seq
604 aa
AA seq
DB search
MINNMTSIIRSTQGGCWGSDRLRLRLYGSVFDLAVMPLIDRVESLQGVIRKVKRIEAMGQ
TGRSNYVDVTKFPKAGTSKLSTDEMPEAPTAPSTYNEKMLANYVPVYVMLPLGVISNDNV
FEDQPKMEKQLKELRAAGVDGVMVDVWWGIVESKGPKQYDWSAYRSLFALVQECGLKLQA
IMSFHRCGGNVGDEVTIPLPQWVLDIGETDPDIFYTNRKGNRNKEYLTIGVDNQPLFHGR
TAVQLYSDNMKSFRQHMSDFIEAGLIIDIEVGLGPAGELRYPSYTGTQGWVFPGIGEFQC
YDKYLEAEFKEAATGAGHPEWGLPDNAGEYNDTPGSTEFFGLNGTYMTEKGKFFLTWYSN
KLLNHGDEILDEANRAFLGCKLKLAAKVAGIHWWYKSPSHAAELTSGYYNLKDRDGYRPI
ARMLSRHYAIFNFTCLEMRDSEQRADAKCGPQELVQQVLSGGWREEVEVAGENALSRYDS
NGYNQMLLNARPNGISREGLPKQIMYGVTYLRLSDELLKDKNFKIFKTFVKKMHTDQDYC
ADLGMYNHQIGPLERSKPKLVMEDLLEATKPMEPFPWGEETDMKVDDFDGVLANLIRKLF
SLFK
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacaacatgacaagcattatacgttcaacacagggtggttgttggggaagtgat
agacttaggcttcggctttatggcagcgttttcgacctggccgtgatgccattgatagat
agagttgagagcttacagggagtaataaggaaggttaaaagaatagaagctatggggcaa
acaggtagatccaactatgttgatgtaacaaaatttcccaaagcagggacatcaaagtta
tcaacagatgaaatgcctgaggctccaactgctccttccacttacaatgaaaagatgtta
gcaaactatgtgccagtctatgtgatgcttccattgggtgttatttcaaatgataatgtt
tttgaagatcagcccaagatggaaaagcagctcaaggagctgagagcagctggtgttgat
ggggtaatggttgatgtttggtgggggattgtggaatcaaaaggacctaagcaatacgat
tggagtgcttataggagcttgtttgcactcgttcaagaatgtggattgaaactacaagcc
attatgtcatttcatcgatgtggtggcaatgttggagacgaagttaccatcccacttcca
caatgggtgcttgacattggtgaaacagaccctgacatattttataccaatcggaaaggt
aaccggaacaaagaatacctcactatcggtgtcgataatcaacctcttttccatggaaga
actgctgtccagttgtacagtgacaacatgaagagctttaggcagcacatgtcagatttt
atagaagcagggctcataatagatattgaagtaggacttggtcctgcaggtgagcttagg
tatccctcttatacaggaacacaaggatgggttttccctggcattggagaatttcaatgc
tatgacaagtacctcgaagcggagttcaaagaagcagcaacgggtgcaggccatcccgaa
tggggattgcctgataatgccggggaatacaatgacacgcctggatccacagagttcttt
ggattgaatgggacatacatgactgagaaagggaagtttttcttgacttggtactccaac
aagttactaaaccatggtgatgagatccttgatgaagctaatagagctttcttggggtgt
aaactgaagctagccgcaaaagtagctggaatacattggtggtataaatctcctagtcat
gcagcagaacttacttcaggatattacaatttgaaagatagagacggatatagacctatt
gcaaggatgctatcaaggcattatgctattttcaatttcacatgtttggagatgagggac
tcagaacaaagagctgatgctaaatgtggacctcaggaacttgttcaacaggttctgagt
ggggggtggagagaggaggtagaagttgcaggagaaaatgcattatcaagatacgacagc
aatggttacaatcagatgctgttaaatgccaggcctaatggtatcagcagagagggtttg
ccaaagcaaattatgtatggggtaacatatcttcgtttatcagatgagcttttgaaagac
aagaatttcaagatattcaagacatttgtgaagaaaatgcatactgatcaagattactgt
gcagatctgggaatgtacaatcaccaaataggtccattggagcggtcaaagccaaagttg
gtgatggaagatctactggaagcaaccaagccaatggagccattcccctggggtgaagaa
acagacatgaaggttgatgattttgatggtgtacttgctaatttgataagaaagctgttt
tccttgttcaagtga
DBGET
integrated database retrieval system